Gene
RNA
| Item | Value |
|---|---|
| gene id | G1171788 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 38187185 ~ 38187485 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106583847 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1336356 | True | 301 | lncRNA | 0.42 | 1 | 38187185 | 38187485 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486281 | LOC106601133 | coding | downstream | 53455 | 38077325 ~ 38133730 (-) |
| LOC110486285 | LOC106607319 | coding | downstream | 135098 | 38043339 ~ 38052087 (-) |
| LOC110486284 | LOC106601139 | coding | downstream | 164871 | 38005936 ~ 38022314 (-) |
| LOC110485169 | LOC106607314 | coding | downstream | 248146 | 37904093 ~ 37939039 (-) |
| LOC110486276 | LOC106601043 | coding | downstream | 312331 | 37869674 ~ 37874854 (-) |
| LOC110486288 | LOC105013206 | coding | upstream | 104727 | 38292212 ~ 38303843 (-) |
| LOC110486290 | LOC106601128 | coding | upstream | 140372 | 38327857 ~ 38365149 (-) |
| LOC110486294 | LOC106607327 | coding | upstream | 203398 | 38390883 ~ 38399323 (-) |
| LOC110486295 | LOC106607327 | coding | upstream | 223755 | 38411240 ~ 38420261 (-) |
| LOC110486297 | LOC106601124 | coding | upstream | 302633 | 38490118 ~ 38551806 (-) |
| G1171764 | NA | non-coding | downstream | 21395 | 38151772 ~ 38165790 (-) |
| G1171720 | LOC106607318 | non-coding | downstream | 152310 | 38029095 ~ 38034875 (-) |
| G1171671 | NA | non-coding | downstream | 287251 | 37899618 ~ 37899934 (-) |
| G1171663 | NA | non-coding | downstream | 317597 | 37868589 ~ 37869588 (-) |
| G1171791 | NA | non-coding | upstream | 7135 | 38194620 ~ 38194838 (-) |
| G1171792 | NA | non-coding | upstream | 7645 | 38195130 ~ 38195366 (-) |
| G1171794 | NA | non-coding | upstream | 10410 | 38197895 ~ 38198098 (-) |
| G1171796 | NA | non-coding | upstream | 13107 | 38200592 ~ 38200804 (-) |
| G1171798 | NA | non-coding | upstream | 14104 | 38201589 ~ 38202384 (-) |
| G1171337 | NA | other | downstream | 988545 | 37198228 ~ 37198640 (-) |
| G1171149 | NA | other | downstream | 1302845 | 36884018 ~ 36884340 (-) |
| G1171057 | hsp70b | other | downstream | 1358760 | 36665169 ~ 36828425 (-) |
| G1171051 | NA | other | downstream | 1590544 | 36595832 ~ 36596641 (-) |
| G1171050 | NA | other | downstream | 1592659 | 36594054 ~ 36594526 (-) |
| LOC110486310 | LOC106601114 | other | upstream | 993289 | 39136920 ~ 39183852 (-) |
| LOC110486313 | snn | other | upstream | 1060667 | 39248150 ~ 39250310 (-) |
| LOC110486318 | kdm8 | other | upstream | 1140731 | 39328216 ~ 39331966 (-) |
| G1173645 | NA | other | upstream | 1736437 | 39923922 ~ 39924959 (-) |
| G1174658 | NA | other | upstream | 2128633 | 40316118 ~ 40316859 (-) |
