Gene
RNA
| Item | Value |
|---|---|
| gene id | G1171792 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 38195130 ~ 38195366 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1336360 | True | 237 | lncRNA | 0.43 | 1 | 38195130 | 38195366 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486281 | LOC106601133 | coding | downstream | 61400 | 38077325 ~ 38133730 (-) |
| LOC110486285 | LOC106607319 | coding | downstream | 143043 | 38043339 ~ 38052087 (-) |
| LOC110486284 | LOC106601139 | coding | downstream | 172816 | 38005936 ~ 38022314 (-) |
| LOC110485169 | LOC106607314 | coding | downstream | 256091 | 37904093 ~ 37939039 (-) |
| LOC110486276 | LOC106601043 | coding | downstream | 320276 | 37869674 ~ 37874854 (-) |
| LOC110486288 | LOC105013206 | coding | upstream | 96846 | 38292212 ~ 38303843 (-) |
| LOC110486290 | LOC106601128 | coding | upstream | 132491 | 38327857 ~ 38365149 (-) |
| LOC110486294 | LOC106607327 | coding | upstream | 195517 | 38390883 ~ 38399323 (-) |
| LOC110486295 | LOC106607327 | coding | upstream | 215874 | 38411240 ~ 38420261 (-) |
| LOC110486297 | LOC106601124 | coding | upstream | 294752 | 38490118 ~ 38551806 (-) |
| G1171791 | NA | non-coding | downstream | 292 | 38194620 ~ 38194838 (-) |
| G1171788 | NA | non-coding | downstream | 7645 | 38187185 ~ 38187485 (-) |
| G1171764 | NA | non-coding | downstream | 29340 | 38151772 ~ 38165790 (-) |
| G1171720 | LOC106607318 | non-coding | downstream | 160255 | 38029095 ~ 38034875 (-) |
| G1171794 | NA | non-coding | upstream | 2529 | 38197895 ~ 38198098 (-) |
| G1171796 | NA | non-coding | upstream | 5226 | 38200592 ~ 38200804 (-) |
| G1171798 | NA | non-coding | upstream | 6223 | 38201589 ~ 38202384 (-) |
| G1171799 | NA | non-coding | upstream | 7409 | 38202775 ~ 38203031 (-) |
| G1171812 | NA | non-coding | upstream | 27624 | 38222990 ~ 38223221 (-) |
| G1171337 | NA | other | downstream | 996490 | 37198228 ~ 37198640 (-) |
| G1171149 | NA | other | downstream | 1310790 | 36884018 ~ 36884340 (-) |
| G1171057 | hsp70b | other | downstream | 1366705 | 36665169 ~ 36828425 (-) |
| G1171051 | NA | other | downstream | 1598489 | 36595832 ~ 36596641 (-) |
| G1171050 | NA | other | downstream | 1600604 | 36594054 ~ 36594526 (-) |
| LOC110486310 | LOC106601114 | other | upstream | 985408 | 39136920 ~ 39183852 (-) |
| LOC110486313 | snn | other | upstream | 1052786 | 39248150 ~ 39250310 (-) |
| LOC110486318 | kdm8 | other | upstream | 1132850 | 39328216 ~ 39331966 (-) |
| G1173645 | NA | other | upstream | 1728556 | 39923922 ~ 39924959 (-) |
| G1174658 | NA | other | upstream | 2120752 | 40316118 ~ 40316859 (-) |
