Gene
RNA
| Item | Value |
|---|---|
| gene id | G1172027 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 38601053 ~ 38601288 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1336606 | True | 236 | lncRNA | 0.36 | 1 | 38601053 | 38601288 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486299 | nudt1 | coding | downstream | 21745 | 38577130 ~ 38579308 (-) |
| LOC110486297 | LOC106601124 | coding | downstream | 49247 | 38490118 ~ 38551806 (-) |
| LOC110486295 | LOC106607327 | coding | downstream | 180792 | 38411240 ~ 38420261 (-) |
| LOC110486294 | LOC106607327 | coding | downstream | 201730 | 38390883 ~ 38399323 (-) |
| LOC110486290 | LOC106601128 | coding | downstream | 235904 | 38327857 ~ 38365149 (-) |
| LOC110486300 | elfn1 | coding | upstream | 111413 | 38712701 ~ 38807558 (-) |
| LOC110486304 | LOC106607337 | coding | upstream | 313839 | 38915127 ~ 38928959 (-) |
| LOC110486307 | LOC106601117 | coding | upstream | 463876 | 39065164 ~ 39071223 (-) |
| LOC110486310 | LOC106601114 | coding | upstream | 535632 | 39136920 ~ 39183852 (-) |
| LOC110486311 | LOC106601151 | coding | upstream | 618791 | 39220079 ~ 39223322 (-) |
| G1172026 | NA | non-coding | downstream | 124 | 38600478 ~ 38600929 (-) |
| G1172025 | NA | non-coding | downstream | 619 | 38599792 ~ 38600434 (-) |
| G1172024 | NA | non-coding | downstream | 1384 | 38599251 ~ 38599669 (-) |
| G1172017 | NA | non-coding | downstream | 5545 | 38595300 ~ 38595508 (-) |
| G1172015 | NA | non-coding | downstream | 7819 | 38592696 ~ 38593234 (-) |
| G1172035 | LOC108238713 | non-coding | upstream | 9765 | 38611053 ~ 38618004 (-) |
| G1172039 | NA | non-coding | upstream | 22038 | 38623326 ~ 38623602 (-) |
| G1172042 | NA | non-coding | upstream | 24625 | 38625913 ~ 38626150 (-) |
| G1172045 | NA | non-coding | upstream | 26375 | 38627663 ~ 38628417 (-) |
| G1172062 | NA | non-coding | upstream | 63069 | 38664357 ~ 38691004 (-) |
| G1171337 | NA | other | downstream | 1402413 | 37198228 ~ 37198640 (-) |
| G1171149 | NA | other | downstream | 1716713 | 36884018 ~ 36884340 (-) |
| G1171057 | hsp70b | other | downstream | 1772628 | 36665169 ~ 36828425 (-) |
| G1171051 | NA | other | downstream | 2004412 | 36595832 ~ 36596641 (-) |
| G1171050 | NA | other | downstream | 2006527 | 36594054 ~ 36594526 (-) |
| LOC110486313 | snn | other | upstream | 646864 | 39248150 ~ 39250310 (-) |
| LOC110486318 | kdm8 | other | upstream | 726928 | 39328216 ~ 39331966 (-) |
| G1173645 | NA | other | upstream | 1322634 | 39923922 ~ 39924959 (-) |
| G1174658 | NA | other | upstream | 1714830 | 40316118 ~ 40316859 (-) |
