Gene
RNA
| Item | Value |
|---|---|
| gene id | G1172361 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 38818001 ~ 38818645 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1336971 | True | 645 | lncRNA | 0.45 | 1 | 38818001 | 38818645 |
38,815,200
38,815,600
38,816,000
38,816,400
38,816,800
38,817,200
38,817,600
38,817,600
38,818,000
38,818,400
38,818,800
38,819,200
38,819,600
38,820,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486300 | elfn1 | coding | downstream | 10443 | 38712701 ~ 38807558 (-) |
| LOC110486299 | nudt1 | coding | downstream | 238693 | 38577130 ~ 38579308 (-) |
| LOC110486297 | LOC106601124 | coding | downstream | 266195 | 38490118 ~ 38551806 (-) |
| LOC110486295 | LOC106607327 | coding | downstream | 397740 | 38411240 ~ 38420261 (-) |
| LOC110486294 | LOC106607327 | coding | downstream | 418678 | 38390883 ~ 38399323 (-) |
| LOC110486304 | LOC106607337 | coding | upstream | 96482 | 38915127 ~ 38928959 (-) |
| LOC110486307 | LOC106601117 | coding | upstream | 246519 | 39065164 ~ 39071223 (-) |
| LOC110486310 | LOC106601114 | coding | upstream | 318275 | 39136920 ~ 39183852 (-) |
| LOC110486311 | LOC106601151 | coding | upstream | 401434 | 39220079 ~ 39223322 (-) |
| LOC110486313 | snn | coding | upstream | 429505 | 39248150 ~ 39250310 (-) |
| G1172240 | NA | non-coding | downstream | 7240 | 38810379 ~ 38810761 (-) |
| G1172230 | NA | non-coding | downstream | 20455 | 38797318 ~ 38797546 (-) |
| G1172177 | NA | non-coding | downstream | 88644 | 38729015 ~ 38729357 (-) |
| G1172062 | NA | non-coding | downstream | 126997 | 38664357 ~ 38691004 (-) |
| G1172045 | NA | non-coding | downstream | 189584 | 38627663 ~ 38628417 (-) |
| G1172372 | NA | non-coding | upstream | 17190 | 38835835 ~ 38836146 (-) |
| G1172431 | NA | non-coding | upstream | 165759 | 38984404 ~ 38990726 (-) |
| G1172485 | NA | non-coding | upstream | 189742 | 39008387 ~ 39008764 (-) |
| G1172557 | NA | non-coding | upstream | 243559 | 39062204 ~ 39062470 (-) |
| G1171337 | NA | other | downstream | 1619361 | 37198228 ~ 37198640 (-) |
| G1171149 | NA | other | downstream | 1933661 | 36884018 ~ 36884340 (-) |
| G1171057 | hsp70b | other | downstream | 1989576 | 36665169 ~ 36828425 (-) |
| G1171051 | NA | other | downstream | 2221360 | 36595832 ~ 36596641 (-) |
| G1171050 | NA | other | downstream | 2223475 | 36594054 ~ 36594526 (-) |
| LOC110486318 | kdm8 | other | upstream | 509571 | 39328216 ~ 39331966 (-) |
| G1173645 | NA | other | upstream | 1105277 | 39923922 ~ 39924959 (-) |
| G1174658 | NA | other | upstream | 1497473 | 40316118 ~ 40316859 (-) |
