Gene
RNA
| Item | Value |
|---|---|
| gene id | G1172261 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 38826027 ~ 38826287 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1336855 | True | 261 | lncRNA | 0.47 | 1 | 38826027 | 38826287 |
38,824,800
38,825,200
38,825,600
38,826,000
38,826,400
38,826,800
38,827,200
38,827,600
38,828,000
38,828,400
38,828,800
38,829,200
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rrmj2 | rrmj2 | coding | upstream | 239030 | 38579499 ~ 38586997 (+) |
| LOC110486298 | LOC106607331 | coding | upstream | 252964 | 38554081 ~ 38573063 (+) |
| LOC110486296 | LOC106607332 | coding | upstream | 343922 | 38474403 ~ 38482105 (+) |
| LOC118938588 | NA | coding | upstream | 403048 | 38422896 ~ 38422979 (+) |
| LOC118938584 | NA | coding | upstream | 403515 | 38422430 ~ 38422512 (+) |
| LOC110486302 | LOC106607335 | coding | downstream | 49874 | 38876161 ~ 38878379 (+) |
| LOC110486303 | LOC106607336 | coding | downstream | 53971 | 38880258 ~ 38903688 (+) |
| LOC110486305 | LOC106607338 | coding | downstream | 107816 | 38934103 ~ 38962100 (+) |
| LOC110487539 | LOC106607115 | coding | downstream | 141231 | 38967518 ~ 38970243 (+) |
| LOC110486306 | LOC106601118 | coding | downstream | 149003 | 38975290 ~ 38990960 (+) |
| G1172252 | NA | non-coding | upstream | 8346 | 38817387 ~ 38817681 (+) |
| G1172251 | NA | non-coding | upstream | 8654 | 38817125 ~ 38817373 (+) |
| G1172249 | NA | non-coding | upstream | 9037 | 38816622 ~ 38816990 (+) |
| G1172248 | NA | non-coding | upstream | 10022 | 38815397 ~ 38816005 (+) |
| G1172247 | NA | non-coding | upstream | 10894 | 38814687 ~ 38815133 (+) |
| G1172273 | NA | non-coding | downstream | 12379 | 38838666 ~ 38839008 (+) |
| G1172278 | NA | non-coding | downstream | 20488 | 38846775 ~ 38846998 (+) |
| G1172282 | NA | non-coding | downstream | 25960 | 38852247 ~ 38852450 (+) |
| G1172288 | NA | non-coding | downstream | 31876 | 38858163 ~ 38858550 (+) |
| G1172292 | NA | non-coding | downstream | 35423 | 38861710 ~ 38895292 (+) |
| G1170455 | NA | other | upstream | 235320 | 38589772 ~ 38590707 (+) |
| G1170322 | NA | other | upstream | 563174 | 38262414 ~ 38262853 (+) |
| G1170288 | NA | other | upstream | 616506 | 38209235 ~ 38209521 (+) |
| G1170195 | NA | other | upstream | 803506 | 38021849 ~ 38022521 (+) |
| LOC110485168 | LOC106601036 | other | upstream | 1181231 | 37638974 ~ 37646678 (+) |
| G1172996 | NA | other | downstream | 647171 | 39473458 ~ 39473779 (+) |
| G1173715 | LOC106601095 | other | downstream | 1254187 | 40080474 ~ 40200482 (+) |
| polr3k | rpc11 | other | downstream | 1528055 | 40354342 ~ 40357833 (+) |
| G1174211 | NA | other | downstream | 2079244 | 40905531 ~ 40906473 (+) |
