Gene
RNA
| Item | Value |
|---|---|
| gene id | G1172816 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 39185796 ~ 39186096 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1337494 | True | 301 | lncRNA | 0.40 | 1 | 39185796 | 39186096 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486310 | LOC106601114 | coding | downstream | 2801 | 39136920 ~ 39183852 (-) |
| LOC110486307 | LOC106601117 | coding | downstream | 114573 | 39065164 ~ 39071223 (-) |
| LOC110486304 | LOC106607337 | coding | downstream | 256837 | 38915127 ~ 38928959 (-) |
| LOC110486300 | elfn1 | coding | downstream | 378238 | 38712701 ~ 38807558 (-) |
| LOC110486299 | nudt1 | coding | downstream | 606488 | 38577130 ~ 38579308 (-) |
| LOC110486311 | LOC106601151 | coding | upstream | 33983 | 39220079 ~ 39223322 (-) |
| LOC110486313 | snn | coding | upstream | 62054 | 39248150 ~ 39250310 (-) |
| LOC110486314 | cp075 | coding | upstream | 67934 | 39254030 ~ 39254795 (-) |
| LOC110486315 | LOC106607344 | coding | upstream | 69723 | 39255819 ~ 39275633 (-) |
| LOC110486317 | LOC100194516 | coding | upstream | 95847 | 39281943 ~ 39287336 (-) |
| G1172811 | NA | non-coding | downstream | 11273 | 39174308 ~ 39174523 (-) |
| G1172658 | NA | non-coding | downstream | 54581 | 39130975 ~ 39131215 (-) |
| G1172651 | NA | non-coding | downstream | 58969 | 39126520 ~ 39126827 (-) |
| G1172638 | LOC106607395 | non-coding | downstream | 68108 | 39117296 ~ 39117688 (-) |
| G1172823 | NA | non-coding | upstream | 92425 | 39278521 ~ 39279864 (-) |
| G1172905 | NA | non-coding | upstream | 179766 | 39365862 ~ 39366086 (-) |
| G1172910 | NA | non-coding | upstream | 183162 | 39369258 ~ 39369479 (-) |
| G1172913 | NA | non-coding | upstream | 184291 | 39370387 ~ 39370652 (-) |
| G1172924 | NA | non-coding | upstream | 188048 | 39374144 ~ 39375370 (-) |
| G1171337 | NA | other | downstream | 1987156 | 37198228 ~ 37198640 (-) |
| G1171149 | NA | other | downstream | 2301456 | 36884018 ~ 36884340 (-) |
| G1171057 | hsp70b | other | downstream | 2357371 | 36665169 ~ 36828425 (-) |
| G1171051 | NA | other | downstream | 2589155 | 36595832 ~ 36596641 (-) |
| LOC110486318 | kdm8 | other | upstream | 142120 | 39328216 ~ 39331966 (-) |
| G1173645 | NA | other | upstream | 737826 | 39923922 ~ 39924959 (-) |
| G1174658 | NA | other | upstream | 1130022 | 40316118 ~ 40316859 (-) |
| G1174741 | NA | other | upstream | 1270799 | 40456895 ~ 40457681 (-) |
