Gene
RNA
| Item | Value |
|---|---|
| gene id | G1172910 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 39369258 ~ 39369479 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1337603 | True | 222 | lncRNA | 0.35 | 1 | 39369258 | 39369479 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486318 | kdm8 | coding | downstream | 37292 | 39328216 ~ 39331966 (-) |
| LOC118936372 | il21r | coding | downstream | 46820 | 39315322 ~ 39322438 (-) |
| il21r | il21r | coding | downstream | 62860 | 39300023 ~ 39306398 (-) |
| LOC110486317 | LOC100194516 | coding | downstream | 81922 | 39281943 ~ 39287336 (-) |
| LOC110486315 | LOC106607344 | coding | downstream | 93625 | 39255819 ~ 39275633 (-) |
| LOC110486320 | LOC106607349 | coding | upstream | 157294 | 39526773 ~ 39615110 (-) |
| LOC110486323 | LOC106607351 | coding | upstream | 369943 | 39739422 ~ 39760173 (-) |
| LOC110486334 | LOC106607235 | coding | upstream | 714190 | 40083669 ~ 40096704 (-) |
| igfals | LOC106601095 | coding | upstream | 727490 | 40096969 ~ 40099584 (-) |
| shisa9b | LOC106607398 | coding | upstream | 818507 | 40187986 ~ 40216345 (-) |
| G1172905 | NA | non-coding | downstream | 3172 | 39365862 ~ 39366086 (-) |
| G1172823 | NA | non-coding | downstream | 89394 | 39278521 ~ 39279864 (-) |
| G1172816 | NA | non-coding | downstream | 183162 | 39185796 ~ 39186096 (-) |
| LOC110486310 | LOC106601114 | non-coding | downstream | 185406 | 39136920 ~ 39183852 (-) |
| G1172811 | NA | non-coding | downstream | 194735 | 39174308 ~ 39174523 (-) |
| G1172913 | NA | non-coding | upstream | 908 | 39370387 ~ 39370652 (-) |
| G1172924 | NA | non-coding | upstream | 4665 | 39374144 ~ 39375370 (-) |
| G1172934 | NA | non-coding | upstream | 16476 | 39385955 ~ 39386293 (-) |
| G1173333 | NA | non-coding | upstream | 106362 | 39475841 ~ 39476080 (-) |
| G1173485 | NA | non-coding | upstream | 329124 | 39698603 ~ 39698845 (-) |
| LOC110486313 | snn | other | downstream | 118948 | 39248150 ~ 39250310 (-) |
| G1171337 | NA | other | downstream | 2170618 | 37198228 ~ 37198640 (-) |
| G1171149 | NA | other | downstream | 2484918 | 36884018 ~ 36884340 (-) |
| G1173645 | NA | other | upstream | 554443 | 39923922 ~ 39924959 (-) |
| G1174658 | NA | other | upstream | 946639 | 40316118 ~ 40316859 (-) |
| G1174741 | NA | other | upstream | 1087416 | 40456895 ~ 40457681 (-) |
| LOC110486364 | LOC106601288 | other | upstream | 1464424 | 40831402 ~ 40843483 (-) |
| col5a3a | LOC106607203 | other | upstream | 1915303 | 41282052 ~ 41362985 (-) |
