Gene
RNA
| Item | Value |
|---|---|
| gene id | G1173505 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 39721138 ~ 39721415 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1338255 | True | 278 | lncRNA | 0.33 | 1 | 39721138 | 39721415 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486320 | LOC106607349 | coding | downstream | 106028 | 39526773 ~ 39615110 (-) |
| LOC110486318 | kdm8 | coding | downstream | 389172 | 39328216 ~ 39331966 (-) |
| LOC118936372 | il21r | coding | downstream | 398700 | 39315322 ~ 39322438 (-) |
| il21r | il21r | coding | downstream | 414740 | 39300023 ~ 39306398 (-) |
| LOC110486317 | LOC100194516 | coding | downstream | 433802 | 39281943 ~ 39287336 (-) |
| LOC110486323 | LOC106607351 | coding | upstream | 18007 | 39739422 ~ 39760173 (-) |
| LOC110486334 | LOC106607235 | coding | upstream | 362254 | 40083669 ~ 40096704 (-) |
| igfals | LOC106601095 | coding | upstream | 375554 | 40096969 ~ 40099584 (-) |
| shisa9b | LOC106607398 | coding | upstream | 466571 | 40187986 ~ 40216345 (-) |
| LOC110486342 | LOC106607365 | coding | upstream | 627372 | 40348787 ~ 40351985 (-) |
| G1173495 | NA | non-coding | downstream | 12892 | 39708039 ~ 39708246 (-) |
| G1173485 | NA | non-coding | downstream | 22293 | 39698603 ~ 39698845 (-) |
| G1173333 | NA | non-coding | downstream | 245058 | 39475841 ~ 39476080 (-) |
| G1172934 | NA | non-coding | downstream | 334845 | 39385955 ~ 39386293 (-) |
| G1172924 | NA | non-coding | downstream | 345768 | 39374144 ~ 39375370 (-) |
| G1173559 | NA | non-coding | upstream | 119531 | 39840946 ~ 39843539 (-) |
| G1173567 | NA | non-coding | upstream | 126997 | 39848412 ~ 39848879 (-) |
| G1173602 | NA | non-coding | upstream | 180130 | 39901545 ~ 39901751 (-) |
| G1173617 | NA | non-coding | upstream | 198688 | 39920103 ~ 39920312 (-) |
| LOC110486313 | snn | other | downstream | 470828 | 39248150 ~ 39250310 (-) |
| LOC110486310 | LOC106601114 | other | downstream | 539944 | 39136920 ~ 39183852 (-) |
| G1171337 | NA | other | downstream | 2522498 | 37198228 ~ 37198640 (-) |
| G1171149 | NA | other | downstream | 2836798 | 36884018 ~ 36884340 (-) |
| G1173645 | NA | other | upstream | 202507 | 39923922 ~ 39924959 (-) |
| G1174658 | NA | other | upstream | 594703 | 40316118 ~ 40316859 (-) |
| G1174741 | NA | other | upstream | 735480 | 40456895 ~ 40457681 (-) |
| LOC110486364 | LOC106601288 | other | upstream | 1112488 | 40831402 ~ 40843483 (-) |
| col5a3a | LOC106607203 | other | upstream | 1563367 | 41282052 ~ 41362985 (-) |
