G1173645


Basic Information

Item Value
gene id G1173645
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 39923922 ~ 39924959 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1338408
GTTTGTATAAATGTACAGTTTGTATtactttaacctttatttaactaggcgtgtcagtaaagaacaaaatcttatttacaatgacggcctaccggggaacagtgggttaactgccttgttcaggggcagaacgacagatttttaccttgtcagctcggggatttgatccagcaaccatttacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaaagatgagagaggcctgtaattttcatcatatgtacacttcaactatgacagacaaaatgagaaaaaaaaatcctgaaaatcacattgtaggattttttatgaatttatttgcaaattatggtgggaaataagtatttggtcacctacaaacaagcaagatttctggctctcacagacctgtaacttctttaagaggatcctctgtcctccactcgttacctatatcaatggcacctgtttgaacttgttatcagtgtaaaatacacctgtccacaacctcaaacagtcacacttcaaactccactatggccaagaccaaagagctgtcaaaggacaccagaaacaaaattgtagacctgcaccaggctgggaagaatgaatcaactgtgggagcaattattaggaaatggaagacatacaagaccactgataatctcgctcgatctggggctccacgcaagatctcaccccgtagggtcaaaatgatcacaagaacggtgagcaaaaatcccagaaccacacggggggacctagtgaatgacctgcagagagctgggaccaaagtaacaaagactaccatcagcaagggcattgaaaatgaaacgtggctggtctttcagcatgacaatgatcccaaacacaccccccgggcaacgaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtccgtgttgcccagcaaaagccccaaaacatcactgctctagagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1338408 True 1038 TUCP 0.43 1 39923922 39924959

Neighbor

gene id symbol gene type direction distance location
LOC110486323 LOC106607351 coding downstream 163749 39739422 ~ 39760173 (-)
LOC110486320 LOC106607349 coding downstream 308812 39526773 ~ 39615110 (-)
LOC110486318 kdm8 coding downstream 591956 39328216 ~ 39331966 (-)
LOC118936372 il21r coding downstream 601484 39315322 ~ 39322438 (-)
il21r il21r coding downstream 617524 39300023 ~ 39306398 (-)
LOC110486334 LOC106607235 coding upstream 158710 40083669 ~ 40096704 (-)
igfals LOC106601095 coding upstream 172010 40096969 ~ 40099584 (-)
shisa9b LOC106607398 coding upstream 263027 40187986 ~ 40216345 (-)
LOC110486342 LOC106607365 coding upstream 423828 40348787 ~ 40351985 (-)
snrnp25 LOC106601091 coding upstream 427134 40352093 ~ 40354570 (-)
G1173617 NA non-coding downstream 3610 39920103 ~ 39920312 (-)
G1173602 NA non-coding downstream 22171 39901545 ~ 39901751 (-)
G1173567 NA non-coding downstream 75043 39848412 ~ 39848879 (-)
G1173559 NA non-coding downstream 80383 39840946 ~ 39843539 (-)
G1173648 NA non-coding upstream 5342 39930301 ~ 39930560 (-)
G1173675 NA non-coding upstream 42934 39967893 ~ 39968218 (-)
G1173681 NA non-coding upstream 45558 39970517 ~ 39970770 (-)
G1173697 NA non-coding upstream 55052 39980011 ~ 39980855 (-)
G1174463 LOC106601099 non-coding upstream 120035 40044994 ~ 40047189 (-)
LOC110486313 snn other downstream 673612 39248150 ~ 39250310 (-)
LOC110486310 LOC106601114 other downstream 742728 39136920 ~ 39183852 (-)
G1171337 NA other downstream 2725282 37198228 ~ 37198640 (-)
G1171149 NA other downstream 3039582 36884018 ~ 36884340 (-)
G1174658 NA other upstream 391159 40316118 ~ 40316859 (-)
G1174741 NA other upstream 531936 40456895 ~ 40457681 (-)
LOC110486364 LOC106601288 other upstream 908944 40831402 ~ 40843483 (-)
col5a3a LOC106607203 other upstream 1359823 41282052 ~ 41362985 (-)
G1175904 LOC106607178 other upstream 2072355 41997314 ~ 41997637 (-)

Expression


Co-expression Network