G1173675



Basic Information


Item Value
gene id G1173675
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 39967893 ~ 39968218 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1338438
ctccagcactcagacatcatttacaaacaaacaaagcATTTAAATTACAGAAAcaccaaaaaacgacttaagttgaactttaaagtatttttacttacgtactttacaccactgtccacacatacaattatctgtaaggtccctcagtcaaacagtgcatttcaaacacagattcaaccacaaagaccagggaggttttccaatgcctcgcaaagaagggcacctattggtagaggtgcaaaaataaaaaagcagacattgaaaatacctttgagcatggtgaaattattaattacactttgaatggtgtatcaatggtgtccttc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1338438 True 326 lncRNA 0.37 1 39967893 39968218

Neighbor


gene id symbol gene type direction distance location
LOC110486323 LOC106607351 coding downstream 207720 39739422 ~ 39760173 (-)
LOC110486320 LOC106607349 coding downstream 352783 39526773 ~ 39615110 (-)
LOC110486318 kdm8 coding downstream 635927 39328216 ~ 39331966 (-)
LOC118936372 il21r coding downstream 645455 39315322 ~ 39322438 (-)
il21r il21r coding downstream 661495 39300023 ~ 39306398 (-)
LOC110486334 LOC106607235 coding upstream 115451 40083669 ~ 40096704 (-)
igfals LOC106601095 coding upstream 128751 40096969 ~ 40099584 (-)
shisa9b LOC106607398 coding upstream 219768 40187986 ~ 40216345 (-)
LOC110486342 LOC106607365 coding upstream 380569 40348787 ~ 40351985 (-)
snrnp25 LOC106601091 coding upstream 383875 40352093 ~ 40354570 (-)
G1173648 NA non-coding downstream 37333 39930301 ~ 39930560 (-)
G1173617 NA non-coding downstream 47581 39920103 ~ 39920312 (-)
G1173602 NA non-coding downstream 66142 39901545 ~ 39901751 (-)
G1173567 NA non-coding downstream 119014 39848412 ~ 39848879 (-)
G1173559 NA non-coding downstream 124354 39840946 ~ 39843539 (-)
G1173681 NA non-coding upstream 2299 39970517 ~ 39970770 (-)
G1173697 NA non-coding upstream 11793 39980011 ~ 39980855 (-)
G1174463 LOC106601099 non-coding upstream 76776 40044994 ~ 40047189 (-)
G1174462 NA non-coding upstream 80800 40049018 ~ 40050749 (-)
G1174477 NA non-coding upstream 84936 40053154 ~ 40053661 (-)
G1173645 NA other downstream 42934 39923922 ~ 39924959 (-)
LOC110486313 snn other downstream 717583 39248150 ~ 39250310 (-)
LOC110486310 LOC106601114 other downstream 786699 39136920 ~ 39183852 (-)
G1171337 NA other downstream 2769253 37198228 ~ 37198640 (-)
G1174658 NA other upstream 347900 40316118 ~ 40316859 (-)
G1174741 NA other upstream 488677 40456895 ~ 40457681 (-)
LOC110486364 LOC106601288 other upstream 865685 40831402 ~ 40843483 (-)
col5a3a LOC106607203 other upstream 1316564 41282052 ~ 41362985 (-)
G1175904 LOC106607178 other upstream 2029096 41997314 ~ 41997637 (-)

Expression



Co-expression Network