Gene
RNA
| Item | Value |
|---|---|
| gene id | G1173697 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 39980011 ~ 39980855 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1338466 | True | 845 | lncRNA | 0.41 | 1 | 39980011 | 39980855 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486323 | LOC106607351 | coding | downstream | 219838 | 39739422 ~ 39760173 (-) |
| LOC110486320 | LOC106607349 | coding | downstream | 364901 | 39526773 ~ 39615110 (-) |
| LOC110486318 | kdm8 | coding | downstream | 648045 | 39328216 ~ 39331966 (-) |
| LOC118936372 | il21r | coding | downstream | 657573 | 39315322 ~ 39322438 (-) |
| il21r | il21r | coding | downstream | 673613 | 39300023 ~ 39306398 (-) |
| LOC110486334 | LOC106607235 | coding | upstream | 102814 | 40083669 ~ 40096704 (-) |
| igfals | LOC106601095 | coding | upstream | 116114 | 40096969 ~ 40099584 (-) |
| shisa9b | LOC106607398 | coding | upstream | 207131 | 40187986 ~ 40216345 (-) |
| LOC110486342 | LOC106607365 | coding | upstream | 367932 | 40348787 ~ 40351985 (-) |
| snrnp25 | LOC106601091 | coding | upstream | 371238 | 40352093 ~ 40354570 (-) |
| G1173681 | NA | non-coding | downstream | 9241 | 39970517 ~ 39970770 (-) |
| G1173675 | NA | non-coding | downstream | 11793 | 39967893 ~ 39968218 (-) |
| G1173648 | NA | non-coding | downstream | 49451 | 39930301 ~ 39930560 (-) |
| G1173617 | NA | non-coding | downstream | 59699 | 39920103 ~ 39920312 (-) |
| G1173602 | NA | non-coding | downstream | 78260 | 39901545 ~ 39901751 (-) |
| G1174463 | LOC106601099 | non-coding | upstream | 64139 | 40044994 ~ 40047189 (-) |
| G1174462 | NA | non-coding | upstream | 68163 | 40049018 ~ 40050749 (-) |
| G1174477 | NA | non-coding | upstream | 72299 | 40053154 ~ 40053661 (-) |
| G1174478 | NA | non-coding | upstream | 73251 | 40054106 ~ 40054431 (-) |
| G1174484 | NA | non-coding | upstream | 81985 | 40062840 ~ 40063209 (-) |
| G1173645 | NA | other | downstream | 55052 | 39923922 ~ 39924959 (-) |
| LOC110486313 | snn | other | downstream | 729701 | 39248150 ~ 39250310 (-) |
| LOC110486310 | LOC106601114 | other | downstream | 798817 | 39136920 ~ 39183852 (-) |
| G1171337 | NA | other | downstream | 2781371 | 37198228 ~ 37198640 (-) |
| G1174658 | NA | other | upstream | 335263 | 40316118 ~ 40316859 (-) |
| G1174741 | NA | other | upstream | 476040 | 40456895 ~ 40457681 (-) |
| LOC110486364 | LOC106601288 | other | upstream | 853048 | 40831402 ~ 40843483 (-) |
| col5a3a | LOC106607203 | other | upstream | 1303927 | 41282052 ~ 41362985 (-) |
| G1175904 | LOC106607178 | other | upstream | 2016459 | 41997314 ~ 41997637 (-) |
