G1173771


Basic Information

Item Value
gene id G1173771
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 40106950 ~ 40108092 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1338544
cacatttttgtaaatatttgagtatatcttttcatgtgacaacactgaagaaatgacactttgctacaatgtaaagtagtgagtgtacagcttgtataacagtgtaaatttgctgtcccctcaaaataactcaacacacagccattaatgtctaaaccactggcaacaaaagtgagtacacccctaagtgaaaatgtccaaatggggcccaattagccatttttcCTCCCCGGTTTCATGTGACCCGTTAgcgttacaaggtctcaggacatggattactggaaccatgtcctgtggtctgatgagaccaagataaacttatttggttcagatggtgtcaagcgtgtgtgggggcaaccaggtgaggagtacaaagacaagtgtgtcttgcctacagtcaagcagtCAAGCATGgtatcatggtctggggctgcatgagtgctgccggcactggggagctacagttcattgagggaaccatgaatgccaacatgtactgtgacatactgaagcagagcatgatcccctcccttcggagactgggccgcagggcagtattccaacataacgaccccaaacacacctccaagacgaccactgccttgctaaagaagctgagggtaaaggtgatggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1338544 True 635 lncRNA 0.46 2 40106950 40108092

Neighbor

gene id symbol gene type direction distance location
LOC110486335 LOC106607360 coding upstream 21455 40068600 ~ 40085495 (+)
LOC110485171 LOC100380767 coding upstream 56185 39993278 ~ 40050765 (+)
gper1 LOC106607359 coding upstream 124804 39973210 ~ 39982146 (+)
LOC110486331 LOC106607358 coding upstream 145950 39943881 ~ 39961000 (+)
LOC110486329 baiap3 coding upstream 214489 39854579 ~ 39892461 (+)
LOC118938286 LOC106585892 coding downstream 162432 40270524 ~ 40273859 (+)
LOC110485173 LOC106601093 coding downstream 194441 40302533 ~ 40348028 (+)
polr3k rpc11 coding downstream 246358 40354342 ~ 40357833 (+)
LOC110486339 LOC106607363 coding downstream 289169 40397261 ~ 40406809 (+)
LOC110486346 LOC106601143 coding downstream 302586 40410678 ~ 40413435 (+)
G1173753 NA non-coding upstream 41268 40065414 ~ 40065682 (+)
G1173751 NA non-coding upstream 43437 40063294 ~ 40063513 (+)
G1173746 NA non-coding upstream 49628 40056955 ~ 40057322 (+)
G1173742 NA non-coding upstream 52731 40053900 ~ 40054219 (+)
G1173709 NA non-coding upstream 116764 39989933 ~ 39990186 (+)
G1173876 NA non-coding downstream 161029 40269121 ~ 40269322 (+)
G1173878 NA non-coding downstream 171665 40279757 ~ 40280046 (+)
G1173885 NA non-coding downstream 179464 40287556 ~ 40287772 (+)
G1173870 NA non-coding downstream 199570 40307662 ~ 40308188 (+)
G1173902 NA non-coding downstream 200937 40309029 ~ 40309264 (+)
G1172996 NA other upstream 633171 39473458 ~ 39473779 (+)
LOC110486302 LOC106607335 other upstream 1228571 38876161 ~ 38878379 (+)
G1170455 NA other upstream 1516243 38589772 ~ 38590707 (+)
G1170322 NA other upstream 1844097 38262414 ~ 38262853 (+)
G1170288 NA other upstream 1897429 38209235 ~ 38209521 (+)
G1174211 NA other downstream 797439 40905531 ~ 40906473 (+)
G1174245 LOC106607208 other downstream 893791 41001883 ~ 41003024 (+)
LOC110486375 LOC106601281 other downstream 947360 41055429 ~ 41065432 (+)
G1175164 NA other downstream 1431399 41539491 ~ 41540680 (+)

Expression


Co-expression Network