Gene
RNA
| Item | Value |
|---|---|
| gene id | G1174661 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 40319925 ~ 40320135 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: coagulation factor XIII A chain-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1339541 | True | 211 | lncRNA | 0.46 | 1 | 40319925 | 40320135 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| shisa9b | LOC106607398 | coding | downstream | 103580 | 40187986 ~ 40216345 (-) |
| igfals | LOC106601095 | coding | downstream | 220341 | 40096969 ~ 40099584 (-) |
| LOC110486334 | LOC106607235 | coding | downstream | 223221 | 40083669 ~ 40096704 (-) |
| LOC110486323 | LOC106607351 | coding | downstream | 559752 | 39739422 ~ 39760173 (-) |
| LOC110486320 | LOC106607349 | coding | downstream | 704815 | 39526773 ~ 39615110 (-) |
| LOC110486342 | LOC106607365 | coding | upstream | 28652 | 40348787 ~ 40351985 (-) |
| snrnp25 | LOC106601091 | coding | upstream | 31958 | 40352093 ~ 40354570 (-) |
| LOC110486343 | LOC106607364 | coding | upstream | 39660 | 40359795 ~ 40370035 (-) |
| LOC110486345 | f100a | coding | upstream | 68809 | 40388944 ~ 40397229 (-) |
| LOC110486347 | LOC106601085 | coding | upstream | 119203 | 40439338 ~ 40484785 (-) |
| G1174650 | NA | non-coding | downstream | 16822 | 40302900 ~ 40303103 (-) |
| G1174648 | NA | non-coding | downstream | 17940 | 40301764 ~ 40301985 (-) |
| G1174633 | NA | non-coding | downstream | 39788 | 40279780 ~ 40280137 (-) |
| G1174628 | NA | non-coding | downstream | 50603 | 40269121 ~ 40269322 (-) |
| G1174626 | NA | non-coding | downstream | 51476 | 40268119 ~ 40268449 (-) |
| G1174662 | NA | non-coding | upstream | 71 | 40320206 ~ 40320409 (-) |
| G1174664 | NA | non-coding | upstream | 1415 | 40321550 ~ 40321760 (-) |
| G1174675 | NA | non-coding | upstream | 15963 | 40336098 ~ 40337491 (-) |
| G1174676 | NA | non-coding | upstream | 17741 | 40337876 ~ 40338604 (-) |
| G1174678 | LOC106601093 | non-coding | upstream | 19508 | 40339643 ~ 40342038 (-) |
| G1174658 | NA | other | downstream | 3066 | 40316118 ~ 40316859 (-) |
| G1173645 | NA | other | downstream | 394966 | 39923922 ~ 39924959 (-) |
| LOC110486318 | kdm8 | other | downstream | 988686 | 39328216 ~ 39331966 (-) |
| LOC110486313 | snn | other | downstream | 1069615 | 39248150 ~ 39250310 (-) |
| LOC110486310 | LOC106601114 | other | downstream | 1138731 | 39136920 ~ 39183852 (-) |
| G1174741 | NA | other | upstream | 136760 | 40456895 ~ 40457681 (-) |
| LOC110486364 | LOC106601288 | other | upstream | 513768 | 40831402 ~ 40843483 (-) |
| col5a3a | LOC106607203 | other | upstream | 964647 | 41282052 ~ 41362985 (-) |
| G1175904 | LOC106607178 | other | upstream | 1677179 | 41997314 ~ 41997637 (-) |
| G1175906 | NA | other | upstream | 1679217 | 41999352 ~ 42000091 (-) |
