G1174792


Basic Information

Item Value
gene id G1174792
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 40592979 ~ 40593872 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1339681
ggcatagtgtatagacaaaggtaaggtaggatgtgagtacattggagataaacctaggcattgagtaatgatgagagatatagtctctagagatgtttaaaccaggtgatgtcatcgcatatgtaggaggtggaacaacatggttggttaaggcatattgagcagggctagaggctctacagtgaaataagacagtaatcactaatcaggacagtaatggacgaggcatattgacattagagagaggcatgcgtagccaagtgaacatatgggtccagtgagtggtcgggctgactggggacacggcaattcagacagttagcaggccgatgctaacaagctagcaattagtagaccggggcaagctagcagttagcagaccgggttagcaagcagttagcagaccggggcaggcaagctagcagttagcagaccggggaaggcaagctagcagttagcagaccggggcaggcaagctagcagttagcagaccgggcaggcaagctagcagttagcagaccggggcaggcaagctagcagttagcagaccggggcaggcaagctagcagttagcagaccggggaaggcaagctagcagttagcagaccggggcaggcaagctagcagttagcagaccggggcaggcaagctagcagttggcagaccgggttagcaagcaagcagttagcaggggctagcagttagcagaccgggcaggcaagctagcagttagcagaccggggcaggcaagctagcagttggcagaccgggttagcaagcaagcagttagctgGGGCTaacagttag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1339681 True 807 lncRNA 0.53 2 40592979 40593872

Neighbor

gene id symbol gene type direction distance location
LOC100136291 LOC100136291 coding downstream 15828 40576326 ~ 40577151 (-)
LOC100136207 LOC106607371 coding downstream 22064 40569835 ~ 40570915 (-)
LOC110486352 LOC100136576 coding downstream 53867 40538054 ~ 40539112 (-)
LOC110486350 LOC106601074 coding downstream 59258 40532802 ~ 40533721 (-)
LOC110486348 LOC106601082 coding downstream 72802 40508078 ~ 40520177 (-)
LOC110486358 LOC106607381 coding upstream 18370 40612242 ~ 40613133 (-)
LOC118938290 NA coding upstream 26287 40620159 ~ 40622878 (-)
LOC110486356 LOC106607377 coding upstream 33676 40627548 ~ 40628386 (-)
LOC100135790 LOC100135790 coding upstream 35865 40629737 ~ 40630688 (-)
LOC110486359 LOC106601060 coding upstream 44339 40638211 ~ 40660823 (-)
G1174706 NA non-coding downstream 51152 40540779 ~ 40541827 (-)
G1174772 NA non-coding downstream 56522 40535767 ~ 40536457 (-)
G1174708 LOC106601078 non-coding downstream 57347 40534743 ~ 40535632 (-)
G1174771 NA non-coding downstream 58817 40533881 ~ 40534162 (-)
G1174765 NA non-coding downstream 93855 40498885 ~ 40499124 (-)
G1174839 NA non-coding upstream 130814 40724686 ~ 40725836 (-)
G1174844 NA non-coding upstream 150753 40744625 ~ 40748705 (-)
LOC110486365 LOC106607218 non-coding upstream 265040 40844051 ~ 40859686 (-)
G1174918 NA non-coding upstream 302789 40896661 ~ 40896873 (-)
G1174933 NA non-coding upstream 324007 40917879 ~ 40918146 (-)
G1174741 NA other downstream 135298 40456895 ~ 40457681 (-)
G1174658 NA other downstream 276120 40316118 ~ 40316859 (-)
G1173645 NA other downstream 668020 39923922 ~ 39924959 (-)
LOC110486318 kdm8 other downstream 1261740 39328216 ~ 39331966 (-)
LOC110486313 snn other downstream 1342669 39248150 ~ 39250310 (-)
LOC110486364 LOC106601288 other upstream 240031 40831402 ~ 40843483 (-)
col5a3a LOC106607203 other upstream 690910 41282052 ~ 41362985 (-)
G1175904 LOC106607178 other upstream 1403442 41997314 ~ 41997637 (-)
G1175906 NA other upstream 1405480 41999352 ~ 42000091 (-)
G1176164 NA other upstream 1734172 42328044 ~ 42328572 (-)

Expression


Co-expression Network