G1174070


Basic Information

Item Value
gene id G1174070
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 40667175 ~ 40667968 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1338886
gagccctgaatgctgattggctgacagctgtggtatatcagacccaataccatgggtatgacaaaacatgcatTTTTGCTGctttaattacattggtaaccagattataatagcaataaggcacctcggagtttgtggtatatggccaatataccacggctaagggctgtatccaggcactccgctttgcgtcgcgcataagaacagccctttgccgtggtatattgaccatataccataCCGCagcgtgccttattgcttaaataaactTAATATCCGTTAAGTTACGCAAACAAACAGCATATTTCATTTACTTTACCTCCCATCCAGAACTCTGGTTGTAGATTTTGTTAAAGGCGTCCTGCAACTTTCCATGGACAGTAGCCAGCTTCTTGAAGTCTCTGTTGGCCTCGTGGACCGGGAGTAGGATCTTATACACCTCGTTGATGGCCTCGTACATGGAAGCCTGCAGGGGAGATACAGTATGAAACAGTGAGAGGACAGTGAGAAGTCTACCTACAATTCATATATACATTACAAAAACCTGGCTTTCTCTATGTGAACATACAGCTCTGACTATTTACTAGGTGGCTCAAAGAGAGATTCAAAAGTTATTTATCACGTATTTAAGGACATCTCAATGTAAAGAAGATCTGAGTAATACCATGTGGAAGGAGGTTGCAGCTTGCTCCAGcagccccaccagccccaccTCGCTGAAGTACTTCCCCGCACAGATACCCTCCTCCTCCGGGGACAGGATGTCATCAGACACCGCTGACTCCTCCAGAACG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1338886 True 794 lncRNA 0.45 1 40667175 40667968

Neighbor

gene id symbol gene type direction distance location
LOC110486355 LOC106601061 coding upstream 43313 40622959 ~ 40623862 (+)
LOC118938289 NA coding upstream 47709 40618440 ~ 40619466 (+)
LOC118936300 LOC100135791 coding upstream 51888 40614297 ~ 40615287 (+)
LOC118936354 NA coding upstream 52115 40610279 ~ 40615060 (+)
LOC118938287 LOC106609103 coding upstream 74188 40588722 ~ 40592987 (+)
LOC110486361 NA coding downstream 13207 40681175 ~ 40683181 (+)
LOC100136169 LOC106607222 coding downstream 46225 40714193 ~ 40733821 (+)
LOC110486371 LOC106607212 coding downstream 265919 40933887 ~ 40967545 (+)
LOC110486372 LOC106607210 coding downstream 307487 40975455 ~ 40989382 (+)
angptl6 LOC106607207 coding downstream 381476 41049444 ~ 41054649 (+)
G1174069 LOC106607387 non-coding upstream 2025 40664927 ~ 40665150 (+)
G1174055 NA non-coding upstream 27568 40637674 ~ 40639607 (+)
G1174047 NA non-coding upstream 42544 40624361 ~ 40624631 (+)
G1173986 NA non-coding upstream 89972 40576218 ~ 40577203 (+)
G1173987 NA non-coding upstream 95150 40569804 ~ 40572025 (+)
G1174071 LOC106601059 non-coding downstream 104 40668072 ~ 40669829 (+)
G1174072 NA non-coding downstream 2413 40670381 ~ 40670974 (+)
G1174073 NA non-coding downstream 3176 40671144 ~ 40671464 (+)
G1174074 NA non-coding downstream 4186 40672154 ~ 40672828 (+)
G1174075 NA non-coding downstream 5344 40673312 ~ 40673585 (+)
polr3k rpc11 other upstream 311202 40354342 ~ 40357833 (+)
G1173715 LOC106601095 other upstream 510996 40080474 ~ 40200482 (+)
G1172996 NA other upstream 1193396 39473458 ~ 39473779 (+)
LOC110486302 LOC106607335 other upstream 1788796 38876161 ~ 38878379 (+)
G1170455 NA other upstream 2076468 38589772 ~ 38590707 (+)
G1174211 NA other downstream 237563 40905531 ~ 40906473 (+)
G1174245 LOC106607208 other downstream 333915 41001883 ~ 41003024 (+)
LOC110486375 LOC106601281 other downstream 387484 41055429 ~ 41065432 (+)
G1175164 NA other downstream 871523 41539491 ~ 41540680 (+)
LOC110486395 ccd56 other downstream 1105522 41773456 ~ 41777013 (+)

Expression


Co-expression Network