G1174074


Basic Information

Item Value
gene id G1174074
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 40672154 ~ 40672828 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1338890
TGAGTCAGTACGTGCCGTGTGCgtctagttgtgtgtgtgtgtgtgtgtgtgtgagagcttgtgtgtgtgaagcctcctcacccctccccatCAGGCTCCAGGATGAGGGATAGTTCAGTCAGCAGCAGGCCAGACAGGAAGTGTTGCTGTCTGAAGGGGACGGAGAGCTCAAACATACTGGCCACACCCTGGTCCTGGTGCATACTGGAGAACGCTGaaccctgagagagggagggagatggatggatggtgagaggagggagaggaaggacttTCTAGCAAGAGTATTACTACAGATGTCCGCAGATGACAAAGTTGGCCCTTGGTCAAGATCACTGTGTTGCCTAGTAATGAATGGAGCTAcctgggaggtggtggaggaggtggagggggagggcgAAGCGGGGGGGCTGAGGGTGGAGCATGGTAGGTTGAGGGTGACGTAGTGCTCATGGCTGCACACAATGCGGGTGAAGTCCATTCTCAGAGCAGTCAGAGAGCTGGGGTTCTGGGCTGTGTGGAACTTGTTGGCaatctgacacacacagacacagacacacacagagagacatatggTTCAGGAATGTGTAAGACAACGTATTCAGGGACGGGTTGCAGTAAAAGCAAATGATGTCATGTGTGTTTGTCATTTGTGATGACTGACAGTGGGTGTAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1338890 True 675 lncRNA 0.53 1 40672154 40672828

Neighbor

gene id symbol gene type direction distance location
LOC110486355 LOC106601061 coding upstream 48292 40622959 ~ 40623862 (+)
LOC118938289 NA coding upstream 52688 40618440 ~ 40619466 (+)
LOC118936300 LOC100135791 coding upstream 56867 40614297 ~ 40615287 (+)
LOC118936354 NA coding upstream 57094 40610279 ~ 40615060 (+)
LOC118938287 LOC106609103 coding upstream 79167 40588722 ~ 40592987 (+)
LOC110486361 NA coding downstream 8347 40681175 ~ 40683181 (+)
LOC100136169 LOC106607222 coding downstream 41365 40714193 ~ 40733821 (+)
LOC110486371 LOC106607212 coding downstream 261059 40933887 ~ 40967545 (+)
LOC110486372 LOC106607210 coding downstream 302627 40975455 ~ 40989382 (+)
angptl6 LOC106607207 coding downstream 376616 41049444 ~ 41054649 (+)
G1174073 NA non-coding upstream 690 40671144 ~ 40671464 (+)
G1174072 NA non-coding upstream 1180 40670381 ~ 40670974 (+)
G1174071 LOC106601059 non-coding upstream 2325 40668072 ~ 40669829 (+)
G1174070 NA non-coding upstream 4186 40667175 ~ 40667968 (+)
G1174069 LOC106607387 non-coding upstream 7004 40664927 ~ 40665150 (+)
G1174075 NA non-coding downstream 484 40673312 ~ 40673585 (+)
G1174076 NA non-coding downstream 1698 40674526 ~ 40674805 (+)
G1174077 NA non-coding downstream 2608 40675436 ~ 40676702 (+)
G1174078 NA non-coding downstream 3949 40676777 ~ 40677146 (+)
G1174080 NA non-coding downstream 4535 40677363 ~ 40677572 (+)
polr3k rpc11 other upstream 316181 40354342 ~ 40357833 (+)
G1173715 LOC106601095 other upstream 515975 40080474 ~ 40200482 (+)
G1172996 NA other upstream 1198375 39473458 ~ 39473779 (+)
LOC110486302 LOC106607335 other upstream 1793775 38876161 ~ 38878379 (+)
G1170455 NA other upstream 2081447 38589772 ~ 38590707 (+)
G1174211 NA other downstream 232703 40905531 ~ 40906473 (+)
G1174245 LOC106607208 other downstream 329055 41001883 ~ 41003024 (+)
LOC110486375 LOC106601281 other downstream 382624 41055429 ~ 41065432 (+)
G1175164 NA other downstream 866663 41539491 ~ 41540680 (+)
LOC110486395 ccd56 other downstream 1100662 41773456 ~ 41777013 (+)

Expression


Co-expression Network