G1174839


Basic Information

Item Value
gene id G1174839
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 40724686 ~ 40725836 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1339736
GTAGGTCAGGGGTACATTAGATTAGAGTTAGGGTAGGTCAGGGGTACATTAGATTAGAGTTATGTTAGGTCAGGGGTATGTTAGAGTTAGAGTAGGTCAGGGGTATGTTAGAGTAGAGTTAGGGTAGGTCAGGGGTACGTTAGATTAGAGTTAGGGTAGGTCAGGGGTACGTTAGATTAGAGTTAGGGTAGGTCAGGGGTATGTTAGAGTAGAGTTAGGGTAGGTCAGGGGTACGTTAGATTAGAGTTATGGTAGGTTAGGGGTACATTAGACTAGAGTTATGGTAGGTCAGGGGTAGGTTAGACTAGAGTTAGGGTAGGTCAGGGGTACGTTAGAGTAGAGTTAAAGTAGGTTAGAGCAGGGGTCAGTTGCGCCAGAAGTGAGTTAAGGCTGTACCTGTAACCTGGTCCACCAGGATGCGGGAGGTGATGATGCGTCCGTACTGGGAGAACAGCTGCTCCATGTCCTTCTGGGTCATGGTCTTAGGCAGACCGCTCACATAGAGGTTGGCATCACGGATAGATGCTGAACTGGGACGGGCGTACGATACCTACAGCACATCAAAGAAACACACATTTTAATACTGATATCAAATCAAAGGTTTCCCATATCTTTACATAAAACCATatagtcatttttttatttacccA

Function

NR:

description
ELAV-like protein 3 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1339736 True 650 lncRNA 0.46 3 40724686 40725836

Neighbor

gene id symbol gene type direction distance location
LOC110486360 LOC106607387 coding downstream 24489 40578110 ~ 40700197 (-)
LOC110486359 LOC106601060 coding downstream 63863 40638211 ~ 40660823 (-)
LOC100135790 LOC100135790 coding downstream 93998 40629737 ~ 40630688 (-)
LOC110486356 LOC106607377 coding downstream 96300 40627548 ~ 40628386 (-)
LOC118938290 NA coding downstream 101808 40620159 ~ 40622878 (-)
LOC110486362 LOC106607221 coding upstream 7873 40733709 ~ 40742950 (-)
LOC110486363 LOC106607220 coding upstream 23259 40749095 ~ 40775504 (-)
LOC110486364 LOC106601288 coding upstream 105566 40831402 ~ 40843483 (-)
LOC110486365 LOC106607218 coding upstream 118215 40844051 ~ 40859686 (-)
LOC110486366 LOC106607217 coding upstream 137970 40863806 ~ 40869040 (-)
G1174792 NA non-coding downstream 130814 40592979 ~ 40593872 (-)
G1174706 NA non-coding downstream 182859 40540779 ~ 40541827 (-)
G1174772 NA non-coding downstream 188229 40535767 ~ 40536457 (-)
G1174708 LOC106601078 non-coding downstream 189054 40534743 ~ 40535632 (-)
G1174844 NA non-coding upstream 18789 40744625 ~ 40748705 (-)
G1174918 NA non-coding upstream 170825 40896661 ~ 40896873 (-)
G1174933 NA non-coding upstream 192043 40917879 ~ 40918146 (-)
G1174973 NA non-coding upstream 243659 40969495 ~ 40969699 (-)
G1174741 NA other downstream 267005 40456895 ~ 40457681 (-)
G1174658 NA other downstream 407827 40316118 ~ 40316859 (-)
G1173645 NA other downstream 799727 39923922 ~ 39924959 (-)
LOC110486318 kdm8 other downstream 1393447 39328216 ~ 39331966 (-)
LOC110486313 snn other downstream 1474376 39248150 ~ 39250310 (-)
col5a3a LOC106607203 other upstream 558946 41282052 ~ 41362985 (-)
G1175904 LOC106607178 other upstream 1271478 41997314 ~ 41997637 (-)
G1175906 NA other upstream 1273516 41999352 ~ 42000091 (-)
G1176164 NA other upstream 1602208 42328044 ~ 42328572 (-)

Expression


Co-expression Network