Gene
RNA
| Item | Value |
|---|---|
| gene id | G1174235 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 40971007 ~ 40971240 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1339084 | True | 234 | lncRNA | 0.49 | 1 | 40971007 | 40971240 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486371 | LOC106607212 | coding | upstream | 3462 | 40933887 ~ 40967545 (+) |
| LOC100136169 | LOC106607222 | coding | upstream | 237186 | 40714193 ~ 40733821 (+) |
| LOC110486361 | NA | coding | upstream | 287826 | 40681175 ~ 40683181 (+) |
| LOC110486355 | LOC106601061 | coding | upstream | 347145 | 40622959 ~ 40623862 (+) |
| LOC118938289 | NA | coding | upstream | 351541 | 40618440 ~ 40619466 (+) |
| LOC110486372 | LOC106607210 | coding | downstream | 4215 | 40975455 ~ 40989382 (+) |
| angptl6 | LOC106607207 | coding | downstream | 78204 | 41049444 ~ 41054649 (+) |
| LOC110486375 | LOC106601281 | coding | downstream | 84189 | 41055429 ~ 41065432 (+) |
| trip10a | LOC106601280 | coding | downstream | 94254 | 41065494 ~ 41087276 (+) |
| LOC110486378 | LOC106601275 | coding | downstream | 409254 | 41380494 ~ 41390385 (+) |
| G1174219 | NA | non-coding | upstream | 37978 | 40932744 ~ 40933029 (+) |
| G1174203 | NA | non-coding | upstream | 74481 | 40896306 ~ 40896526 (+) |
| G1174193 | NA | non-coding | upstream | 79891 | 40885714 ~ 40891116 (+) |
| G1174201 | NA | non-coding | upstream | 86366 | 40884266 ~ 40884641 (+) |
| G1174200 | NA | non-coding | upstream | 86774 | 40879722 ~ 40884233 (+) |
| G1174236 | NA | non-coding | downstream | 765 | 40972005 ~ 40972268 (+) |
| G1174241 | eif3g | non-coding | downstream | 18347 | 40989587 ~ 40990177 (+) |
| G1174249 | NA | non-coding | downstream | 35985 | 41007225 ~ 41007451 (+) |
| G1174253 | NA | non-coding | downstream | 75280 | 41046520 ~ 41046763 (+) |
| G1174247 | NA | non-coding | downstream | 83434 | 41054674 ~ 41055079 (+) |
| G1174211 | NA | other | upstream | 64534 | 40905531 ~ 40906473 (+) |
| polr3k | rpc11 | other | upstream | 615034 | 40354342 ~ 40357833 (+) |
| G1173715 | LOC106601095 | other | upstream | 814828 | 40080474 ~ 40200482 (+) |
| G1172996 | NA | other | upstream | 1497228 | 39473458 ~ 39473779 (+) |
| LOC110486302 | LOC106607335 | other | upstream | 2092628 | 38876161 ~ 38878379 (+) |
| G1174245 | LOC106607208 | other | downstream | 30643 | 41001883 ~ 41003024 (+) |
| G1175164 | NA | other | downstream | 568251 | 41539491 ~ 41540680 (+) |
| LOC110486395 | ccd56 | other | downstream | 802250 | 41773456 ~ 41777013 (+) |
| G1175317 | LOC106601258 | other | downstream | 823120 | 41794360 ~ 41794807 (+) |
