Gene
RNA
| Item | Value |
|---|---|
| gene id | G1174236 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 40972005 ~ 40972268 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1339085 | True | 264 | lncRNA | 0.41 | 1 | 40972005 | 40972268 |
40,970,800
40,971,200
40,971,600
40,972,000
40,972,400
40,972,800
40,973,200
40,973,600
40,974,000
40,974,400
40,974,800
40,975,200
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486371 | LOC106607212 | coding | upstream | 4460 | 40933887 ~ 40967545 (+) |
| LOC100136169 | LOC106607222 | coding | upstream | 238184 | 40714193 ~ 40733821 (+) |
| LOC110486361 | NA | coding | upstream | 288824 | 40681175 ~ 40683181 (+) |
| LOC110486355 | LOC106601061 | coding | upstream | 348143 | 40622959 ~ 40623862 (+) |
| LOC118938289 | NA | coding | upstream | 352539 | 40618440 ~ 40619466 (+) |
| LOC110486372 | LOC106607210 | coding | downstream | 3187 | 40975455 ~ 40989382 (+) |
| angptl6 | LOC106607207 | coding | downstream | 77176 | 41049444 ~ 41054649 (+) |
| LOC110486375 | LOC106601281 | coding | downstream | 83161 | 41055429 ~ 41065432 (+) |
| trip10a | LOC106601280 | coding | downstream | 93226 | 41065494 ~ 41087276 (+) |
| LOC110486378 | LOC106601275 | coding | downstream | 408226 | 41380494 ~ 41390385 (+) |
| G1174235 | NA | non-coding | upstream | 765 | 40971007 ~ 40971240 (+) |
| G1174219 | NA | non-coding | upstream | 38976 | 40932744 ~ 40933029 (+) |
| G1174203 | NA | non-coding | upstream | 75479 | 40896306 ~ 40896526 (+) |
| G1174193 | NA | non-coding | upstream | 80889 | 40885714 ~ 40891116 (+) |
| G1174201 | NA | non-coding | upstream | 87364 | 40884266 ~ 40884641 (+) |
| G1174241 | eif3g | non-coding | downstream | 17319 | 40989587 ~ 40990177 (+) |
| G1174249 | NA | non-coding | downstream | 34957 | 41007225 ~ 41007451 (+) |
| G1174253 | NA | non-coding | downstream | 74252 | 41046520 ~ 41046763 (+) |
| G1174247 | NA | non-coding | downstream | 82406 | 41054674 ~ 41055079 (+) |
| G1174211 | NA | other | upstream | 65532 | 40905531 ~ 40906473 (+) |
| polr3k | rpc11 | other | upstream | 616032 | 40354342 ~ 40357833 (+) |
| G1173715 | LOC106601095 | other | upstream | 815826 | 40080474 ~ 40200482 (+) |
| G1172996 | NA | other | upstream | 1498226 | 39473458 ~ 39473779 (+) |
| LOC110486302 | LOC106607335 | other | upstream | 2093626 | 38876161 ~ 38878379 (+) |
| G1174245 | LOC106607208 | other | downstream | 29615 | 41001883 ~ 41003024 (+) |
| G1175164 | NA | other | downstream | 567223 | 41539491 ~ 41540680 (+) |
| LOC110486395 | ccd56 | other | downstream | 801222 | 41773456 ~ 41777013 (+) |
| G1175317 | LOC106601258 | other | downstream | 822092 | 41794360 ~ 41794807 (+) |
