G1175204


Basic Information

Item Value
gene id G1175204
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 41559917 ~ 41560138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1340159
GGAAAAGAGTGTAGCCTCGTTTAGTGAGGGtaggcatggagggaagaggaggggaggatgagagggtCTGTGTTTACTTCTAGCTGAGTGTTCCCAGTCACCACCCTCCAACCAGCACAAGTTTCCAAGGTGATATGTTATCTGGCCGTGGCCGGCTGACAGACATTAGGCCTGTTCCTTgcctgctactgctgctgttgtttgCTCCACAAACCATAATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1340159 True 222 lncRNA 0.52 1 41559917 41560138

Neighbor

gene id symbol gene type direction distance location
shfl LOC106607198 coding upstream 30168 41524871 ~ 41529749 (+)
LOC118938292 NA coding upstream 44920 41514455 ~ 41514997 (+)
LOC110486381 mfap4 coding upstream 50273 41508313 ~ 41509644 (+)
notch3 LOC108243718 coding upstream 52181 41460389 ~ 41507736 (+)
LOC110486378 LOC106601275 coding upstream 169532 41380494 ~ 41390385 (+)
LOC110486386 LOC106607191 coding downstream 21560 41581698 ~ 41594890 (+)
LOC110486388 LOC106607193 coding downstream 34353 41594491 ~ 41603120 (+)
LOC110486389 LOC106607190 coding downstream 47780 41607918 ~ 41610175 (+)
LOC110486391 LOC106601265 coding downstream 124724 41684862 ~ 41709237 (+)
LOC110486392 NA coding downstream 156241 41716379 ~ 41724910 (+)
G1175192 NA non-coding upstream 24046 41535138 ~ 41535871 (+)
G1174442 NA non-coding upstream 149138 41410518 ~ 41410779 (+)
G1174441 NA non-coding upstream 149646 41410035 ~ 41410271 (+)
G1174440 NA non-coding upstream 151788 41407827 ~ 41408129 (+)
G1174430 NA non-coding upstream 168409 41391044 ~ 41391508 (+)
G1175206 NA non-coding downstream 1188 41561326 ~ 41561542 (+)
G1175217 NA non-coding downstream 44274 41604412 ~ 41604623 (+)
G1175218 NA non-coding downstream 44861 41604999 ~ 41605218 (+)
G1175219 NA non-coding downstream 46037 41606175 ~ 41606379 (+)
G1175164 NA other upstream 19237 41539491 ~ 41540680 (+)
LOC110486375 LOC106601281 other upstream 499980 41055429 ~ 41065432 (+)
G1174245 LOC106607208 other upstream 556893 41001883 ~ 41003024 (+)
G1174211 NA other upstream 653444 40905531 ~ 40906473 (+)
polr3k rpc11 other upstream 1203944 40354342 ~ 40357833 (+)
LOC110486395 ccd56 other downstream 213352 41773456 ~ 41777013 (+)
G1175317 LOC106601258 other downstream 234222 41794360 ~ 41794807 (+)
G1175346 NA other downstream 297051 41857189 ~ 41859343 (+)
G1175667 NA other downstream 366137 41926275 ~ 41926656 (+)
G1176084 LOC106607173 other downstream 728953 42289091 ~ 42291866 (+)

Expression


Co-expression Network