G1175217


Basic Information

Item Value
gene id G1175217
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 41604412 ~ 41604623 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1340172
CTTATGAGATGTGATTACCTTATTTGCCTGAATTACAGTCAGAAGAtggttgtggttgcaggttcagaGATTTACAAATAAGTATGCAAAAGTCCCTTTTCTGAACGGCCTAGTCATGAGACATAACATGAGCATGTCTGGCTTATAATGAATATGGTTTTGTTAGTAGTTTGTCACCCTTTTAGGTACAACAAAAACGGTGAAAATTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1340172 True 212 lncRNA 0.36 1 41604412 41604623

Neighbor

gene id symbol gene type direction distance location
LOC110486388 LOC106607193 coding upstream 1292 41594491 ~ 41603120 (+)
LOC110486386 LOC106607191 coding upstream 9522 41581698 ~ 41594890 (+)
shfl LOC106607198 coding upstream 74663 41524871 ~ 41529749 (+)
LOC118938292 NA coding upstream 89415 41514455 ~ 41514997 (+)
LOC110486381 mfap4 coding upstream 94768 41508313 ~ 41509644 (+)
LOC110486389 LOC106607190 coding downstream 3295 41607918 ~ 41610175 (+)
LOC110486391 LOC106601265 coding downstream 80239 41684862 ~ 41709237 (+)
LOC110486392 NA coding downstream 111756 41716379 ~ 41724910 (+)
LOC110486393 rl23 coding downstream 120492 41725115 ~ 41732993 (+)
LOC110486394 LOC106601260 coding downstream 134885 41739508 ~ 41772444 (+)
G1175206 NA non-coding upstream 42870 41561326 ~ 41561542 (+)
G1175204 NA non-coding upstream 44274 41559917 ~ 41560138 (+)
G1175192 NA non-coding upstream 68541 41535138 ~ 41535871 (+)
G1174442 NA non-coding upstream 193633 41410518 ~ 41410779 (+)
G1174441 NA non-coding upstream 194141 41410035 ~ 41410271 (+)
G1175218 NA non-coding downstream 376 41604999 ~ 41605218 (+)
G1175219 NA non-coding downstream 1552 41606175 ~ 41606379 (+)
G1175226 NA non-coding downstream 15259 41619882 ~ 41620120 (+)
G1175238 NA non-coding downstream 37883 41642506 ~ 41642772 (+)
G1175164 NA other upstream 63732 41539491 ~ 41540680 (+)
LOC110486375 LOC106601281 other upstream 544475 41055429 ~ 41065432 (+)
G1174245 LOC106607208 other upstream 601388 41001883 ~ 41003024 (+)
G1174211 NA other upstream 697939 40905531 ~ 40906473 (+)
polr3k rpc11 other upstream 1248439 40354342 ~ 40357833 (+)
LOC110486395 ccd56 other downstream 168867 41773456 ~ 41777013 (+)
G1175317 LOC106601258 other downstream 189737 41794360 ~ 41794807 (+)
G1175346 NA other downstream 252566 41857189 ~ 41859343 (+)
G1175667 NA other downstream 321652 41926275 ~ 41926656 (+)
G1176084 LOC106607173 other downstream 684468 42289091 ~ 42291866 (+)

Expression


Co-expression Network