Gene
RNA
| Item | Value |
|---|---|
| gene id | G1175452 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 41620129 ~ 41620363 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1340478 | True | 235 | lncRNA | 0.46 | 1 | 41620129 | 41620363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486387 | LOC106601269 | coding | downstream | 38552 | 41573449 ~ 41581577 (-) |
| LOC110486385 | LOC100194731 | coding | downstream | 52704 | 41564055 ~ 41567425 (-) |
| LOC110486384 | LOC106601296 | coding | downstream | 61279 | 41554989 ~ 41558850 (-) |
| LOC110486383 | myst2 | coding | downstream | 66538 | 41541160 ~ 41553591 (-) |
| LOC110486379 | LOC106601273 | coding | downstream | 102539 | 41479727 ~ 41517590 (-) |
| LOC110487540 | NA | coding | upstream | 27768 | 41648131 ~ 41650433 (-) |
| LOC110486390 | LOC106607189 | coding | upstream | 45148 | 41665511 ~ 41675898 (-) |
| rl23 | rl23 | coding | upstream | 109676 | 41730039 ~ 41732989 (-) |
| LOC110486396 | LOC106601258 | coding | upstream | 157986 | 41776509 ~ 41857626 (-) |
| LOC110487541 | LOC106607111 | coding | upstream | 242398 | 41862761 ~ 41863809 (-) |
| G1175441 | NA | non-coding | downstream | 13750 | 41606161 ~ 41606379 (-) |
| G1175440 | NA | non-coding | downstream | 15041 | 41604869 ~ 41605088 (-) |
| G1175422 | NA | non-coding | downstream | 52093 | 41567727 ~ 41568036 (-) |
| G1175419 | NA | non-coding | downstream | 57444 | 41562485 ~ 41562685 (-) |
| G1175407 | NA | non-coding | downstream | 84258 | 41534277 ~ 41535871 (-) |
| G1175469 | NA | non-coding | upstream | 23977 | 41644340 ~ 41644602 (-) |
| G1175470 | NA | non-coding | upstream | 24312 | 41644675 ~ 41645255 (-) |
| G1175478 | NA | non-coding | upstream | 36364 | 41656727 ~ 41657044 (-) |
| G1175483 | NA | non-coding | upstream | 43850 | 41664213 ~ 41664418 (-) |
| G1175495 | NA | non-coding | upstream | 58738 | 41679101 ~ 41679820 (-) |
| col5a3a | LOC106607203 | other | downstream | 328335 | 41282052 ~ 41362985 (-) |
| LOC110486364 | LOC106601288 | other | downstream | 785493 | 40831402 ~ 40843483 (-) |
| G1174741 | NA | other | downstream | 1162448 | 40456895 ~ 40457681 (-) |
| G1174658 | NA | other | downstream | 1303270 | 40316118 ~ 40316859 (-) |
| G1173645 | NA | other | downstream | 1695170 | 39923922 ~ 39924959 (-) |
| G1175904 | LOC106607178 | other | upstream | 376951 | 41997314 ~ 41997637 (-) |
| G1175906 | NA | other | upstream | 378989 | 41999352 ~ 42000091 (-) |
| G1176164 | NA | other | upstream | 707681 | 42328044 ~ 42328572 (-) |
| LOC110486413 | rbx1 | other | upstream | 832796 | 42453094 ~ 42456995 (-) |
| LOC110487542 | LOC106607166 | other | upstream | 849339 | 42469256 ~ 42477053 (-) |
