G1175256


Basic Information

Item Value
gene id G1175256
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 41673580 ~ 41673840 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1340211
GGGAGTGGAGGGGAAAGATGTAGGTGTGCTCCAGGAAGTTTTAGAACTGGTGCTCCTGCTGGGGCCTTGAGTACAACTTAATCTCACAGTGCGGGAGAGAGAAGTTACTGCCTCCTCACTTCCTGATCCAGGAGAGCCTGGCAACTCAGTCAGCTCTATCTGCATGGTGAGGTCAAGGGCGGGAACCACAACTGTCGATTTGATCTTCTTCACCCATGTGACAATGTCCATGCACTTGGCAGTAAACTCATCTCTAGTTAA

Function

NR:

description
uncharacterized protein LOC109897338

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1340211 True 261 lncRNA 0.51 1 41673580 41673840

Neighbor

gene id symbol gene type direction distance location
LOC110486389 LOC106607190 coding upstream 63405 41607918 ~ 41610175 (+)
LOC110486388 LOC106607193 coding upstream 70460 41594491 ~ 41603120 (+)
LOC110486386 LOC106607191 coding upstream 78690 41581698 ~ 41594890 (+)
shfl LOC106607198 coding upstream 143831 41524871 ~ 41529749 (+)
LOC118938292 NA coding upstream 158583 41514455 ~ 41514997 (+)
LOC110486391 LOC106601265 coding downstream 11022 41684862 ~ 41709237 (+)
LOC110486392 NA coding downstream 42539 41716379 ~ 41724910 (+)
LOC110486393 rl23 coding downstream 51275 41725115 ~ 41732993 (+)
LOC110486394 LOC106601260 coding downstream 65668 41739508 ~ 41772444 (+)
LOC110486395 ccd56 coding downstream 99616 41773456 ~ 41777013 (+)
G1175238 NA non-coding upstream 30808 41642506 ~ 41642772 (+)
G1175226 NA non-coding upstream 53460 41619882 ~ 41620120 (+)
G1175219 NA non-coding upstream 67201 41606175 ~ 41606379 (+)
G1175218 NA non-coding upstream 68362 41604999 ~ 41605218 (+)
G1175257 LOC106607189 non-coding downstream 521 41674361 ~ 41674622 (+)
G1175260 NA non-coding downstream 4142 41677982 ~ 41678186 (+)
G1175263 NA non-coding downstream 7042 41680882 ~ 41681308 (+)
G1175286 NA non-coding downstream 53092 41726932 ~ 41727536 (+)
G1175164 NA other upstream 132900 41539491 ~ 41540680 (+)
LOC110486375 LOC106601281 other upstream 613643 41055429 ~ 41065432 (+)
G1174245 LOC106607208 other upstream 670556 41001883 ~ 41003024 (+)
G1174211 NA other upstream 767107 40905531 ~ 40906473 (+)
polr3k rpc11 other upstream 1317607 40354342 ~ 40357833 (+)
G1175317 LOC106601258 other downstream 120520 41794360 ~ 41794807 (+)
G1175346 NA other downstream 183349 41857189 ~ 41859343 (+)
G1175667 NA other downstream 252435 41926275 ~ 41926656 (+)
G1176084 LOC106607173 other downstream 615251 42289091 ~ 42291866 (+)

Expression


Co-expression Network