Gene
RNA
| Item | Value |
|---|---|
| gene id | G1175495 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 41679101 ~ 41679820 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cytosolic phospholipase A2 gamma isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1340522 | True | 454 | lncRNA | 0.50 | 2 | 41679101 | 41679820 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486390 | LOC106607189 | coding | downstream | 3203 | 41665511 ~ 41675898 (-) |
| LOC110487540 | NA | coding | downstream | 28668 | 41648131 ~ 41650433 (-) |
| LOC110486387 | LOC106601269 | coding | downstream | 97524 | 41573449 ~ 41581577 (-) |
| LOC110486385 | LOC100194731 | coding | downstream | 111676 | 41564055 ~ 41567425 (-) |
| LOC110486384 | LOC106601296 | coding | downstream | 120251 | 41554989 ~ 41558850 (-) |
| rl23 | rl23 | coding | upstream | 50219 | 41730039 ~ 41732989 (-) |
| LOC110486396 | LOC106601258 | coding | upstream | 98529 | 41776509 ~ 41857626 (-) |
| LOC110487541 | LOC106607111 | coding | upstream | 182941 | 41862761 ~ 41863809 (-) |
| LOC110486400 | LOC106601255 | coding | upstream | 327826 | 42007646 ~ 42015906 (-) |
| LOC110486406 | LOC106607173 | coding | upstream | 530402 | 42210222 ~ 42291977 (-) |
| G1175483 | NA | non-coding | downstream | 14683 | 41664213 ~ 41664418 (-) |
| G1175478 | NA | non-coding | downstream | 22057 | 41656727 ~ 41657044 (-) |
| G1175470 | NA | non-coding | downstream | 33846 | 41644675 ~ 41645255 (-) |
| G1175469 | NA | non-coding | downstream | 34499 | 41644340 ~ 41644602 (-) |
| G1175452 | NA | non-coding | downstream | 58738 | 41620129 ~ 41620363 (-) |
| G1175498 | NA | non-coding | upstream | 4098 | 41683918 ~ 41684196 (-) |
| G1175512 | NA | non-coding | upstream | 27418 | 41707238 ~ 41711678 (-) |
| G1175513 | NA | non-coding | upstream | 32604 | 41712424 ~ 41712930 (-) |
| G1175518 | LOC106607185 | non-coding | upstream | 45364 | 41725184 ~ 41725562 (-) |
| G1175464 | NA | non-coding | upstream | 48117 | 41727937 ~ 41728220 (-) |
| col5a3a | LOC106607203 | other | downstream | 387307 | 41282052 ~ 41362985 (-) |
| LOC110486364 | LOC106601288 | other | downstream | 844465 | 40831402 ~ 40843483 (-) |
| G1174741 | NA | other | downstream | 1221420 | 40456895 ~ 40457681 (-) |
| G1174658 | NA | other | downstream | 1362242 | 40316118 ~ 40316859 (-) |
| G1173645 | NA | other | downstream | 1754142 | 39923922 ~ 39924959 (-) |
| G1175904 | LOC106607178 | other | upstream | 317494 | 41997314 ~ 41997637 (-) |
| G1175906 | NA | other | upstream | 319532 | 41999352 ~ 42000091 (-) |
| G1176164 | NA | other | upstream | 648224 | 42328044 ~ 42328572 (-) |
| LOC110486413 | rbx1 | other | upstream | 773339 | 42453094 ~ 42456995 (-) |
| LOC110487542 | LOC106607166 | other | upstream | 789882 | 42469256 ~ 42477053 (-) |
