Item | Value |
---|---|
gene id | G1175263 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 41680882 ~ 41681308 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1340218 | True | 427 | lncRNA | 0.41 | 1 | 41680882 | 41681308 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110486389 | LOC106607190 | coding | upstream | 70707 | 41607918 ~ 41610175 (+) |
LOC110486388 | LOC106607193 | coding | upstream | 77762 | 41594491 ~ 41603120 (+) |
LOC110486386 | LOC106607191 | coding | upstream | 85992 | 41581698 ~ 41594890 (+) |
shfl | LOC106607198 | coding | upstream | 151133 | 41524871 ~ 41529749 (+) |
LOC118938292 | NA | coding | upstream | 165885 | 41514455 ~ 41514997 (+) |
LOC110486391 | LOC106601265 | coding | downstream | 3554 | 41684862 ~ 41709237 (+) |
LOC110486392 | NA | coding | downstream | 35071 | 41716379 ~ 41724910 (+) |
LOC110486393 | rl23 | coding | downstream | 43807 | 41725115 ~ 41732993 (+) |
LOC110486394 | LOC106601260 | coding | downstream | 58200 | 41739508 ~ 41772444 (+) |
LOC110486395 | ccd56 | coding | downstream | 92148 | 41773456 ~ 41777013 (+) |
G1175260 | NA | non-coding | upstream | 2696 | 41677982 ~ 41678186 (+) |
G1175257 | LOC106607189 | non-coding | upstream | 6260 | 41674361 ~ 41674622 (+) |
G1175256 | NA | non-coding | upstream | 7042 | 41673580 ~ 41673840 (+) |
G1175238 | NA | non-coding | upstream | 38110 | 41642506 ~ 41642772 (+) |
G1175226 | NA | non-coding | upstream | 60762 | 41619882 ~ 41620120 (+) |
G1175286 | NA | non-coding | downstream | 45624 | 41726932 ~ 41727536 (+) |
G1175289 | NA | non-coding | downstream | 56524 | 41737832 ~ 41738067 (+) |
G1175303 | LOC108429078 | non-coding | downstream | 99097 | 41780405 ~ 41780816 (+) |
G1175304 | LOC106601258 | non-coding | downstream | 100169 | 41781477 ~ 41782047 (+) |
G1175164 | NA | other | upstream | 140202 | 41539491 ~ 41540680 (+) |
LOC110486375 | LOC106601281 | other | upstream | 620945 | 41055429 ~ 41065432 (+) |
G1174245 | LOC106607208 | other | upstream | 677858 | 41001883 ~ 41003024 (+) |
G1174211 | NA | other | upstream | 774409 | 40905531 ~ 40906473 (+) |
polr3k | rpc11 | other | upstream | 1324909 | 40354342 ~ 40357833 (+) |
G1175317 | LOC106601258 | other | downstream | 113052 | 41794360 ~ 41794807 (+) |
G1175346 | NA | other | downstream | 175881 | 41857189 ~ 41859343 (+) |
G1175667 | NA | other | downstream | 244967 | 41926275 ~ 41926656 (+) |
G1176084 | LOC106607173 | other | downstream | 607783 | 42289091 ~ 42291866 (+) |