G1175263



Basic Information


Item Value
gene id G1175263
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 41680882 ~ 41681308 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1340218
CTATTAtgtaacaaaaaacaacaacatatgaCTGTTCTGCATGCACAAATTCCTCCCACGGAACTTCTAGATAGGGCTCTACCTGTACAGAGCACATGCCCCTTAAAAAAAAAACCACCTCTATACAGTTTTTGTCCTTATTGTTCTGAACCCACTTCTCGCAAGTAGTCTTTAAATTTGTGTAGAACATGTTTCATTTAATTAGCCATTAAGATGTGGCCATCTATTGCTTCTATGCAACTAAATAATCAGTCAGGTTTGTTCAACGAGACTGTGACCGTGGTTGCAGATTTTTTGGTTGGAGCACCTGTCCCCAAAATGGTTTGTGCACAGTAGGCTTACACTCCTAGAACAttcacacctggcccaggtgGCAATTAGCGAGAGGTTCTCTGCCCAGAGACATTTGCAATGTTTTTTTGTAAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1340218 True 427 lncRNA 0.41 1 41680882 41681308

Neighbor


gene id symbol gene type direction distance location
LOC110486389 LOC106607190 coding upstream 70707 41607918 ~ 41610175 (+)
LOC110486388 LOC106607193 coding upstream 77762 41594491 ~ 41603120 (+)
LOC110486386 LOC106607191 coding upstream 85992 41581698 ~ 41594890 (+)
shfl LOC106607198 coding upstream 151133 41524871 ~ 41529749 (+)
LOC118938292 NA coding upstream 165885 41514455 ~ 41514997 (+)
LOC110486391 LOC106601265 coding downstream 3554 41684862 ~ 41709237 (+)
LOC110486392 NA coding downstream 35071 41716379 ~ 41724910 (+)
LOC110486393 rl23 coding downstream 43807 41725115 ~ 41732993 (+)
LOC110486394 LOC106601260 coding downstream 58200 41739508 ~ 41772444 (+)
LOC110486395 ccd56 coding downstream 92148 41773456 ~ 41777013 (+)
G1175260 NA non-coding upstream 2696 41677982 ~ 41678186 (+)
G1175257 LOC106607189 non-coding upstream 6260 41674361 ~ 41674622 (+)
G1175256 NA non-coding upstream 7042 41673580 ~ 41673840 (+)
G1175238 NA non-coding upstream 38110 41642506 ~ 41642772 (+)
G1175226 NA non-coding upstream 60762 41619882 ~ 41620120 (+)
G1175286 NA non-coding downstream 45624 41726932 ~ 41727536 (+)
G1175289 NA non-coding downstream 56524 41737832 ~ 41738067 (+)
G1175303 LOC108429078 non-coding downstream 99097 41780405 ~ 41780816 (+)
G1175304 LOC106601258 non-coding downstream 100169 41781477 ~ 41782047 (+)
G1175164 NA other upstream 140202 41539491 ~ 41540680 (+)
LOC110486375 LOC106601281 other upstream 620945 41055429 ~ 41065432 (+)
G1174245 LOC106607208 other upstream 677858 41001883 ~ 41003024 (+)
G1174211 NA other upstream 774409 40905531 ~ 40906473 (+)
polr3k rpc11 other upstream 1324909 40354342 ~ 40357833 (+)
G1175317 LOC106601258 other downstream 113052 41794360 ~ 41794807 (+)
G1175346 NA other downstream 175881 41857189 ~ 41859343 (+)
G1175667 NA other downstream 244967 41926275 ~ 41926656 (+)
G1176084 LOC106607173 other downstream 607783 42289091 ~ 42291866 (+)

Expression



Co-expression Network