Gene
RNA
| Item | Value |
|---|---|
| gene id | G1175317 |
| gene name | LOC106601258 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 41794360 ~ 41794807 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1340287 | True | 448 | TUCP | 0.60 | 1 | 41794360 | 41794807 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486395 | ccd56 | coding | upstream | 17347 | 41773456 ~ 41777013 (+) |
| LOC110486394 | LOC106601260 | coding | upstream | 21916 | 41739508 ~ 41772444 (+) |
| LOC110486393 | rl23 | coding | upstream | 63301 | 41725115 ~ 41732993 (+) |
| LOC110486392 | NA | coding | upstream | 69450 | 41716379 ~ 41724910 (+) |
| LOC110486391 | LOC106601265 | coding | upstream | 85123 | 41684862 ~ 41709237 (+) |
| tanc2a | LOC106607178 | coding | downstream | 76841 | 41871648 ~ 42008584 (+) |
| hdac5 | LOC106607176 | coding | downstream | 252583 | 42047390 ~ 42133078 (+) |
| LOC110486402 | LOC106607175 | coding | downstream | 338822 | 42133629 ~ 42142203 (+) |
| LOC110486404 | LOC106601293 | coding | downstream | 360367 | 42155174 ~ 42158198 (+) |
| LOC110486405 | LOC106601250 | coding | downstream | 368381 | 42163188 ~ 42204767 (+) |
| G1175315 | NA | non-coding | upstream | 1660 | 41792408 ~ 41792700 (+) |
| G1175314 | NA | non-coding | upstream | 3052 | 41791005 ~ 41791308 (+) |
| G1175312 | NA | non-coding | upstream | 5089 | 41789054 ~ 41789271 (+) |
| G1175307 | NA | non-coding | upstream | 9282 | 41784850 ~ 41785078 (+) |
| G1175304 | LOC106601258 | non-coding | upstream | 12313 | 41781477 ~ 41782047 (+) |
| G1175318 | LOC106607180 | non-coding | downstream | 146 | 41794953 ~ 41795172 (+) |
| G1175322 | NA | non-coding | downstream | 11211 | 41806018 ~ 41806274 (+) |
| G1175324 | NA | non-coding | downstream | 12820 | 41807627 ~ 41807827 (+) |
| G1175326 | NA | non-coding | downstream | 17729 | 41812536 ~ 41812850 (+) |
| G1175329 | NA | non-coding | downstream | 21682 | 41816489 ~ 41816734 (+) |
| G1175164 | NA | other | upstream | 253680 | 41539491 ~ 41540680 (+) |
| LOC110486375 | LOC106601281 | other | upstream | 734423 | 41055429 ~ 41065432 (+) |
| G1174245 | LOC106607208 | other | upstream | 791336 | 41001883 ~ 41003024 (+) |
| G1174211 | NA | other | upstream | 887887 | 40905531 ~ 40906473 (+) |
| G1175346 | NA | other | downstream | 62382 | 41857189 ~ 41859343 (+) |
| G1175667 | NA | other | downstream | 131468 | 41926275 ~ 41926656 (+) |
| G1176084 | LOC106607173 | other | downstream | 494284 | 42289091 ~ 42291866 (+) |
| G1176278 | LOC106607164 | other | downstream | 687570 | 42482377 ~ 42484520 (+) |
| LOC110486430 | LOC106601228 | other | downstream | 931195 | 42725254 ~ 42734581 (+) |
