Gene
RNA
| Item | Value |
|---|---|
| gene id | G1175631 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 41877540 ~ 41877774 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1340662 | True | 235 | lncRNA | 0.41 | 1 | 41877540 | 41877774 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486395 | ccd56 | coding | upstream | 100527 | 41773456 ~ 41777013 (+) |
| LOC110486394 | LOC106601260 | coding | upstream | 105096 | 41739508 ~ 41772444 (+) |
| LOC110486393 | rl23 | coding | upstream | 146481 | 41725115 ~ 41732993 (+) |
| LOC110486392 | NA | coding | upstream | 152630 | 41716379 ~ 41724910 (+) |
| LOC110486391 | LOC106601265 | coding | upstream | 168303 | 41684862 ~ 41709237 (+) |
| hdac5 | LOC106607176 | coding | downstream | 169616 | 42047390 ~ 42133078 (+) |
| LOC110486402 | LOC106607175 | coding | downstream | 255855 | 42133629 ~ 42142203 (+) |
| LOC110486404 | LOC106601293 | coding | downstream | 277400 | 42155174 ~ 42158198 (+) |
| LOC110486405 | LOC106601250 | coding | downstream | 285414 | 42163188 ~ 42204767 (+) |
| LOC110486408 | LOC106601246 | coding | downstream | 499520 | 42377294 ~ 42395739 (+) |
| G1175331 | NA | non-coding | upstream | 57216 | 41820112 ~ 41820324 (+) |
| G1175329 | NA | non-coding | upstream | 60806 | 41816489 ~ 41816734 (+) |
| G1175326 | NA | non-coding | upstream | 64690 | 41812536 ~ 41812850 (+) |
| G1175324 | NA | non-coding | upstream | 69713 | 41807627 ~ 41807827 (+) |
| G1175322 | NA | non-coding | upstream | 71266 | 41806018 ~ 41806274 (+) |
| G1175648 | NA | non-coding | downstream | 23373 | 41901147 ~ 41901639 (+) |
| G1175659 | NA | non-coding | downstream | 37616 | 41915390 ~ 41915644 (+) |
| G1175668 | NA | non-coding | downstream | 49632 | 41927406 ~ 41927726 (+) |
| G1175670 | NA | non-coding | downstream | 51732 | 41929506 ~ 41929706 (+) |
| G1175675 | NA | non-coding | downstream | 60144 | 41937918 ~ 41938129 (+) |
| G1175346 | NA | other | upstream | 18197 | 41857189 ~ 41859343 (+) |
| G1175317 | LOC106601258 | other | upstream | 82733 | 41794360 ~ 41794807 (+) |
| G1175164 | NA | other | upstream | 336860 | 41539491 ~ 41540680 (+) |
| LOC110486375 | LOC106601281 | other | upstream | 817603 | 41055429 ~ 41065432 (+) |
| G1175667 | NA | other | downstream | 48501 | 41926275 ~ 41926656 (+) |
| G1176084 | LOC106607173 | other | downstream | 411317 | 42289091 ~ 42291866 (+) |
| G1176278 | LOC106607164 | other | downstream | 604603 | 42482377 ~ 42484520 (+) |
| LOC110486430 | LOC106601228 | other | downstream | 848228 | 42725254 ~ 42734581 (+) |
| LOC110486447 | LOC106607129 | other | downstream | 1087719 | 42963102 ~ 42990476 (+) |
