Gene
RNA
| Item | Value |
|---|---|
| gene id | G1175842 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 41918583 ~ 41918821 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1340881 | True | 239 | lncRNA | 0.43 | 1 | 41918583 | 41918821 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487541 | LOC106607111 | coding | downstream | 54774 | 41862761 ~ 41863809 (-) |
| LOC110486396 | LOC106601258 | coding | downstream | 60957 | 41776509 ~ 41857626 (-) |
| rl23 | rl23 | coding | downstream | 185594 | 41730039 ~ 41732989 (-) |
| LOC110486390 | LOC106607189 | coding | downstream | 242685 | 41665511 ~ 41675898 (-) |
| LOC110487540 | NA | coding | downstream | 268150 | 41648131 ~ 41650433 (-) |
| LOC110486400 | LOC106601255 | coding | upstream | 88825 | 42007646 ~ 42015906 (-) |
| LOC110486406 | LOC106607173 | coding | upstream | 291401 | 42210222 ~ 42291977 (-) |
| LOC118938459 | NA | coding | upstream | 431707 | 42350528 ~ 42357245 (-) |
| LOC110486410 | LOC106607167 | coding | upstream | 476981 | 42395802 ~ 42424908 (-) |
| LOC110486411 | LOC106607168 | coding | upstream | 507555 | 42426376 ~ 42435161 (-) |
| G1175836 | NA | non-coding | downstream | 7803 | 41910510 ~ 41910780 (-) |
| G1175833 | NA | non-coding | downstream | 11696 | 41906657 ~ 41906887 (-) |
| G1175832 | NA | non-coding | downstream | 12072 | 41906195 ~ 41906511 (-) |
| G1175828 | NA | non-coding | downstream | 16997 | 41901256 ~ 41901586 (-) |
| G1175826 | NA | non-coding | downstream | 19681 | 41898673 ~ 41898902 (-) |
| G1175846 | NA | non-coding | upstream | 3223 | 41922044 ~ 41922243 (-) |
| G1175852 | NA | non-coding | upstream | 8975 | 41927796 ~ 41928014 (-) |
| G1175853 | NA | non-coding | upstream | 9578 | 41928399 ~ 41928666 (-) |
| G1175856 | NA | non-coding | upstream | 13254 | 41932075 ~ 41932348 (-) |
| G1175860 | NA | non-coding | upstream | 21959 | 41940780 ~ 41941110 (-) |
| col5a3a | LOC106607203 | other | downstream | 626789 | 41282052 ~ 41362985 (-) |
| LOC110486364 | LOC106601288 | other | downstream | 1083947 | 40831402 ~ 40843483 (-) |
| G1174741 | NA | other | downstream | 1460902 | 40456895 ~ 40457681 (-) |
| G1174658 | NA | other | downstream | 1601724 | 40316118 ~ 40316859 (-) |
| G1173645 | NA | other | downstream | 1993624 | 39923922 ~ 39924959 (-) |
| G1175904 | LOC106607178 | other | upstream | 78493 | 41997314 ~ 41997637 (-) |
| G1175906 | NA | other | upstream | 80531 | 41999352 ~ 42000091 (-) |
| G1176164 | NA | other | upstream | 409223 | 42328044 ~ 42328572 (-) |
| LOC110486413 | rbx1 | other | upstream | 534338 | 42453094 ~ 42456995 (-) |
| LOC110487542 | LOC106607166 | other | upstream | 550881 | 42469256 ~ 42477053 (-) |
