Gene
RNA
| Item | Value |
|---|---|
| gene id | G1175890 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 41981421 ~ 41981691 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1340929 | True | 271 | lncRNA | 0.42 | 1 | 41981421 | 41981691 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487541 | LOC106607111 | coding | downstream | 117612 | 41862761 ~ 41863809 (-) |
| LOC110486396 | LOC106601258 | coding | downstream | 123795 | 41776509 ~ 41857626 (-) |
| rl23 | rl23 | coding | downstream | 248432 | 41730039 ~ 41732989 (-) |
| LOC110486390 | LOC106607189 | coding | downstream | 305523 | 41665511 ~ 41675898 (-) |
| LOC110487540 | NA | coding | downstream | 330988 | 41648131 ~ 41650433 (-) |
| LOC110486400 | LOC106601255 | coding | upstream | 25955 | 42007646 ~ 42015906 (-) |
| LOC110486406 | LOC106607173 | coding | upstream | 228531 | 42210222 ~ 42291977 (-) |
| LOC118938459 | NA | coding | upstream | 368837 | 42350528 ~ 42357245 (-) |
| LOC110486410 | LOC106607167 | coding | upstream | 414111 | 42395802 ~ 42424908 (-) |
| LOC110486411 | LOC106607168 | coding | upstream | 444685 | 42426376 ~ 42435161 (-) |
| G1175882 | NA | non-coding | downstream | 12003 | 41968774 ~ 41969418 (-) |
| G1175878 | NA | non-coding | downstream | 18874 | 41961846 ~ 41962547 (-) |
| G1175872 | NA | non-coding | downstream | 28670 | 41952546 ~ 41952751 (-) |
| G1175868 | NA | non-coding | downstream | 31642 | 41949549 ~ 41949779 (-) |
| G1175863 | NA | non-coding | downstream | 37733 | 41943468 ~ 41943688 (-) |
| G1175892 | NA | non-coding | upstream | 1549 | 41983240 ~ 41983478 (-) |
| G1175893 | NA | non-coding | upstream | 2387 | 41984078 ~ 41984358 (-) |
| G1175894 | LOC106607178 | non-coding | upstream | 3050 | 41984741 ~ 41985213 (-) |
| G1175895 | NA | non-coding | upstream | 4172 | 41985863 ~ 41986321 (-) |
| G1175898 | NA | non-coding | upstream | 10142 | 41991833 ~ 41992398 (-) |
| col5a3a | LOC106607203 | other | downstream | 689627 | 41282052 ~ 41362985 (-) |
| LOC110486364 | LOC106601288 | other | downstream | 1146785 | 40831402 ~ 40843483 (-) |
| G1174741 | NA | other | downstream | 1523740 | 40456895 ~ 40457681 (-) |
| G1174658 | NA | other | downstream | 1664562 | 40316118 ~ 40316859 (-) |
| G1173645 | NA | other | downstream | 2056462 | 39923922 ~ 39924959 (-) |
| G1175904 | LOC106607178 | other | upstream | 15623 | 41997314 ~ 41997637 (-) |
| G1175906 | NA | other | upstream | 17661 | 41999352 ~ 42000091 (-) |
| G1176164 | NA | other | upstream | 346353 | 42328044 ~ 42328572 (-) |
| LOC110486413 | rbx1 | other | upstream | 471468 | 42453094 ~ 42456995 (-) |
| LOC110487542 | LOC106607166 | other | upstream | 488011 | 42469256 ~ 42477053 (-) |
