G1175895


Basic Information

Item Value
gene id G1175895
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 41985863 ~ 41986321 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1340934
gctcataagtaagcatttcactgtaagatctgttgtattcggcgcatgtgactaatacaatttgatttgaatgctaCAGTGGGGGACTTGGGGCGCCGCACTCGTTCTCGCCAACATTCACACTTCTTTATCTCGCTCCGCTCCCTCGTTACCAGGGTGCCTCCCtcctatctttctttctctctctgtgattctctctctccagctccccctcagtctctccccccAGTCACCAGAGGGACTATGCCCATGGCTTTGATGTTTCAGTGCTGCCTGGGCCAAGCCTCTCCATGCCCGGTTtatcctccctccttttccctatCCATCTTTCTTACGcagactcccctctctctctactaaaCTAATGTTGCTCATTCCTTCCATCTTACTGATGACTAGAATCTATGCCACACATTCTCCCCTTTTCTCCTATATGCGTTTGTCTTTtttccttttcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1340934 True 459 lncRNA 0.49 1 41985863 41986321

Neighbor

gene id symbol gene type direction distance location
LOC110487541 LOC106607111 coding downstream 122054 41862761 ~ 41863809 (-)
LOC110486396 LOC106601258 coding downstream 128237 41776509 ~ 41857626 (-)
rl23 rl23 coding downstream 252874 41730039 ~ 41732989 (-)
LOC110486390 LOC106607189 coding downstream 309965 41665511 ~ 41675898 (-)
LOC110487540 NA coding downstream 335430 41648131 ~ 41650433 (-)
LOC110486400 LOC106601255 coding upstream 21325 42007646 ~ 42015906 (-)
LOC110486406 LOC106607173 coding upstream 223901 42210222 ~ 42291977 (-)
LOC118938459 NA coding upstream 364207 42350528 ~ 42357245 (-)
LOC110486410 LOC106607167 coding upstream 409481 42395802 ~ 42424908 (-)
LOC110486411 LOC106607168 coding upstream 440055 42426376 ~ 42435161 (-)
G1175894 LOC106607178 non-coding downstream 650 41984741 ~ 41985213 (-)
G1175893 NA non-coding downstream 1505 41984078 ~ 41984358 (-)
G1175892 NA non-coding downstream 2385 41983240 ~ 41983478 (-)
G1175890 NA non-coding downstream 4172 41981421 ~ 41981691 (-)
G1175882 NA non-coding downstream 16445 41968774 ~ 41969418 (-)
G1175898 NA non-coding upstream 5512 41991833 ~ 41992398 (-)
G1175899 LOC106601254 non-coding upstream 6840 41993161 ~ 41993417 (-)
G1175901 NA non-coding upstream 7875 41994196 ~ 41994423 (-)
G1175902 LOC106601254 non-coding upstream 9742 41996063 ~ 41996729 (-)
G1175903 NA non-coding upstream 10620 41996941 ~ 41997206 (-)
col5a3a LOC106607203 other downstream 694069 41282052 ~ 41362985 (-)
LOC110486364 LOC106601288 other downstream 1151227 40831402 ~ 40843483 (-)
G1174741 NA other downstream 1528182 40456895 ~ 40457681 (-)
G1174658 NA other downstream 1669004 40316118 ~ 40316859 (-)
G1173645 NA other downstream 2060904 39923922 ~ 39924959 (-)
G1175904 LOC106607178 other upstream 10993 41997314 ~ 41997637 (-)
G1175906 NA other upstream 13031 41999352 ~ 42000091 (-)
G1176164 NA other upstream 341723 42328044 ~ 42328572 (-)
LOC110486413 rbx1 other upstream 466838 42453094 ~ 42456995 (-)
LOC110487542 LOC106607166 other upstream 483381 42469256 ~ 42477053 (-)

Expression


Co-expression Network