G1175713


Basic Information

Item Value
gene id G1175713
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 41987487 ~ 41987698 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1340744
agaggcccctgtgttgaggatcagcatggtggatgtgttgttacctacccttaccacctgggggaggtccgtcaggaagtccaggatccagttgcagagtgtttagtcccagggtctttagctttttgatgagctttgagggcactatggtgttgaacactgagctgtagtcaattaatagctttctcacataggtgttccttttgtccagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1340744 True 212 lncRNA 0.49 1 41987487 41987698

Neighbor

gene id symbol gene type direction distance location
LOC110486395 ccd56 coding upstream 210474 41773456 ~ 41777013 (+)
LOC110486394 LOC106601260 coding upstream 215043 41739508 ~ 41772444 (+)
LOC110486393 rl23 coding upstream 256428 41725115 ~ 41732993 (+)
LOC110486392 NA coding upstream 262577 41716379 ~ 41724910 (+)
LOC110486391 LOC106601265 coding upstream 278250 41684862 ~ 41709237 (+)
hdac5 LOC106607176 coding downstream 59692 42047390 ~ 42133078 (+)
LOC110486402 LOC106607175 coding downstream 145931 42133629 ~ 42142203 (+)
LOC110486404 LOC106601293 coding downstream 167476 42155174 ~ 42158198 (+)
LOC110486405 LOC106601250 coding downstream 175490 42163188 ~ 42204767 (+)
LOC110486408 LOC106601246 coding downstream 389596 42377294 ~ 42395739 (+)
G1175712 NA non-coding upstream 5 41987283 ~ 41987482 (+)
G1175710 NA non-coding upstream 3797 41983442 ~ 41983690 (+)
G1175675 NA non-coding upstream 49358 41937918 ~ 41938129 (+)
G1175670 NA non-coding upstream 57781 41929506 ~ 41929706 (+)
G1175668 NA non-coding upstream 59761 41927406 ~ 41927726 (+)
G1175715 NA non-coding downstream 682 41988380 ~ 41988621 (+)
G1175732 NA non-coding downstream 42697 42030395 ~ 42030619 (+)
G1175735 NA non-coding downstream 48358 42036056 ~ 42036260 (+)
G1175737 NA non-coding downstream 54119 42041817 ~ 42042089 (+)
G1175667 NA other upstream 60831 41926275 ~ 41926656 (+)
G1175346 NA other upstream 128144 41857189 ~ 41859343 (+)
G1175317 LOC106601258 other upstream 192680 41794360 ~ 41794807 (+)
G1175164 NA other upstream 446807 41539491 ~ 41540680 (+)
G1176084 LOC106607173 other downstream 301393 42289091 ~ 42291866 (+)
G1176278 LOC106607164 other downstream 494679 42482377 ~ 42484520 (+)
LOC110486430 LOC106601228 other downstream 738304 42725254 ~ 42734581 (+)
LOC110486447 LOC106607129 other downstream 977795 42963102 ~ 42990476 (+)
LOC110485182 LOC106607095 other downstream 1271477 43259175 ~ 43265600 (+)

Expression


Co-expression Network