G1175715


Basic Information

Item Value
gene id G1175715
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 41988380 ~ 41988621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1340746
GGGGgggacgtcatcgatgcacttattggtgaagccaatgactgatggtGTACTcgtcaatgccatcggaagaatcccagaacatattccagtctgtgctagcaaaacagtcctgtagcttagcatctgcttcatctgaacactttttttattgatctagtcccGGGTGCTTCctattttaatttttgcttgtaagtggaatcaggaggatagagttatggtcagatttgccaaatggaggg

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 3, axonemal, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1340746 True 242 lncRNA 0.44 1 41988380 41988621

Neighbor

gene id symbol gene type direction distance location
LOC110486395 ccd56 coding upstream 211367 41773456 ~ 41777013 (+)
LOC110486394 LOC106601260 coding upstream 215936 41739508 ~ 41772444 (+)
LOC110486393 rl23 coding upstream 257321 41725115 ~ 41732993 (+)
LOC110486392 NA coding upstream 263470 41716379 ~ 41724910 (+)
LOC110486391 LOC106601265 coding upstream 279143 41684862 ~ 41709237 (+)
hdac5 LOC106607176 coding downstream 58769 42047390 ~ 42133078 (+)
LOC110486402 LOC106607175 coding downstream 145008 42133629 ~ 42142203 (+)
LOC110486404 LOC106601293 coding downstream 166553 42155174 ~ 42158198 (+)
LOC110486405 LOC106601250 coding downstream 174567 42163188 ~ 42204767 (+)
LOC110486408 LOC106601246 coding downstream 388673 42377294 ~ 42395739 (+)
G1175713 NA non-coding upstream 682 41987487 ~ 41987698 (+)
G1175712 NA non-coding upstream 898 41987283 ~ 41987482 (+)
G1175710 NA non-coding upstream 4690 41983442 ~ 41983690 (+)
G1175675 NA non-coding upstream 50251 41937918 ~ 41938129 (+)
G1175670 NA non-coding upstream 58674 41929506 ~ 41929706 (+)
G1175732 NA non-coding downstream 41774 42030395 ~ 42030619 (+)
G1175735 NA non-coding downstream 47435 42036056 ~ 42036260 (+)
G1175737 NA non-coding downstream 53196 42041817 ~ 42042089 (+)
G1176062 NA non-coding downstream 264386 42253007 ~ 42253213 (+)
G1175667 NA other upstream 61724 41926275 ~ 41926656 (+)
G1175346 NA other upstream 129037 41857189 ~ 41859343 (+)
G1175317 LOC106601258 other upstream 193573 41794360 ~ 41794807 (+)
G1175164 NA other upstream 447700 41539491 ~ 41540680 (+)
G1176084 LOC106607173 other downstream 300470 42289091 ~ 42291866 (+)
G1176278 LOC106607164 other downstream 493756 42482377 ~ 42484520 (+)
LOC110486430 LOC106601228 other downstream 737381 42725254 ~ 42734581 (+)
LOC110486447 LOC106607129 other downstream 976872 42963102 ~ 42990476 (+)
LOC110485182 LOC106607095 other downstream 1270554 43259175 ~ 43265600 (+)

Expression


Co-expression Network