Gene
RNA
| Item | Value |
|---|---|
| gene id | G1175903 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 41996941 ~ 41997206 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: protein TANC2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1340944 | True | 266 | lncRNA | 0.57 | 1 | 41996941 | 41997206 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487541 | LOC106607111 | coding | downstream | 133132 | 41862761 ~ 41863809 (-) |
| LOC110486396 | LOC106601258 | coding | downstream | 139315 | 41776509 ~ 41857626 (-) |
| rl23 | rl23 | coding | downstream | 263952 | 41730039 ~ 41732989 (-) |
| LOC110486390 | LOC106607189 | coding | downstream | 321043 | 41665511 ~ 41675898 (-) |
| LOC110487540 | NA | coding | downstream | 346508 | 41648131 ~ 41650433 (-) |
| LOC110486400 | LOC106601255 | coding | upstream | 10440 | 42007646 ~ 42015906 (-) |
| LOC110486406 | LOC106607173 | coding | upstream | 213016 | 42210222 ~ 42291977 (-) |
| LOC118938459 | NA | coding | upstream | 353322 | 42350528 ~ 42357245 (-) |
| LOC110486410 | LOC106607167 | coding | upstream | 398596 | 42395802 ~ 42424908 (-) |
| LOC110486411 | LOC106607168 | coding | upstream | 429170 | 42426376 ~ 42435161 (-) |
| G1175902 | LOC106601254 | non-coding | downstream | 212 | 41996063 ~ 41996729 (-) |
| G1175901 | NA | non-coding | downstream | 2518 | 41994196 ~ 41994423 (-) |
| G1175899 | LOC106601254 | non-coding | downstream | 3524 | 41993161 ~ 41993417 (-) |
| G1175898 | NA | non-coding | downstream | 4543 | 41991833 ~ 41992398 (-) |
| G1175895 | NA | non-coding | downstream | 10620 | 41985863 ~ 41986321 (-) |
| G1175905 | LOC106607178 | non-coding | upstream | 1073 | 41998279 ~ 41998510 (-) |
| G1175907 | NA | non-coding | upstream | 2992 | 42000198 ~ 42001217 (-) |
| G1175912 | NA | non-coding | upstream | 18760 | 42015966 ~ 42016182 (-) |
| G1175913 | NA | non-coding | upstream | 19547 | 42016753 ~ 42017028 (-) |
| G1175917 | NA | non-coding | upstream | 24340 | 42021546 ~ 42021781 (-) |
| col5a3a | LOC106607203 | other | downstream | 705147 | 41282052 ~ 41362985 (-) |
| LOC110486364 | LOC106601288 | other | downstream | 1162305 | 40831402 ~ 40843483 (-) |
| G1174741 | NA | other | downstream | 1539260 | 40456895 ~ 40457681 (-) |
| G1174658 | NA | other | downstream | 1680082 | 40316118 ~ 40316859 (-) |
| G1173645 | NA | other | downstream | 2071982 | 39923922 ~ 39924959 (-) |
| G1175904 | LOC106607178 | other | upstream | 108 | 41997314 ~ 41997637 (-) |
| G1175906 | NA | other | upstream | 2146 | 41999352 ~ 42000091 (-) |
| G1176164 | NA | other | upstream | 330838 | 42328044 ~ 42328572 (-) |
| LOC110486413 | rbx1 | other | upstream | 455953 | 42453094 ~ 42456995 (-) |
| LOC110487542 | LOC106607166 | other | upstream | 472496 | 42469256 ~ 42477053 (-) |
