Gene
RNA
| Item | Value |
|---|---|
| gene id | G1175912 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 42015966 ~ 42016182 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1340955 | True | 217 | lncRNA | 0.40 | 1 | 42015966 | 42016182 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486400 | LOC106601255 | coding | downstream | 60 | 42007646 ~ 42015906 (-) |
| LOC110487541 | LOC106607111 | coding | downstream | 152157 | 41862761 ~ 41863809 (-) |
| LOC110486396 | LOC106601258 | coding | downstream | 158340 | 41776509 ~ 41857626 (-) |
| rl23 | rl23 | coding | downstream | 282977 | 41730039 ~ 41732989 (-) |
| LOC110486390 | LOC106607189 | coding | downstream | 340068 | 41665511 ~ 41675898 (-) |
| LOC110486406 | LOC106607173 | coding | upstream | 194040 | 42210222 ~ 42291977 (-) |
| LOC118938459 | NA | coding | upstream | 334346 | 42350528 ~ 42357245 (-) |
| LOC110486410 | LOC106607167 | coding | upstream | 379620 | 42395802 ~ 42424908 (-) |
| LOC110486411 | LOC106607168 | coding | upstream | 410194 | 42426376 ~ 42435161 (-) |
| LOC110486413 | rbx1 | coding | upstream | 436912 | 42453094 ~ 42456995 (-) |
| G1175907 | NA | non-coding | downstream | 14749 | 42000198 ~ 42001217 (-) |
| G1175905 | LOC106607178 | non-coding | downstream | 17456 | 41998279 ~ 41998510 (-) |
| G1175903 | NA | non-coding | downstream | 18760 | 41996941 ~ 41997206 (-) |
| G1175902 | LOC106601254 | non-coding | downstream | 19237 | 41996063 ~ 41996729 (-) |
| G1175901 | NA | non-coding | downstream | 21543 | 41994196 ~ 41994423 (-) |
| G1175913 | NA | non-coding | upstream | 571 | 42016753 ~ 42017028 (-) |
| G1175917 | NA | non-coding | upstream | 5364 | 42021546 ~ 42021781 (-) |
| G1175927 | NA | non-coding | upstream | 20083 | 42036265 ~ 42036510 (-) |
| G1176037 | LOC106601250 | non-coding | upstream | 187567 | 42203749 ~ 42206674 (-) |
| G1176101 | NA | non-coding | upstream | 201346 | 42217528 ~ 42217752 (-) |
| G1175906 | NA | other | downstream | 15875 | 41999352 ~ 42000091 (-) |
| G1175904 | LOC106607178 | other | downstream | 18329 | 41997314 ~ 41997637 (-) |
| col5a3a | LOC106607203 | other | downstream | 724172 | 41282052 ~ 41362985 (-) |
| LOC110486364 | LOC106601288 | other | downstream | 1181330 | 40831402 ~ 40843483 (-) |
| G1174741 | NA | other | downstream | 1558285 | 40456895 ~ 40457681 (-) |
| G1176164 | NA | other | upstream | 311862 | 42328044 ~ 42328572 (-) |
| LOC110487542 | LOC106607166 | other | upstream | 453520 | 42469256 ~ 42477053 (-) |
| G1176749 | NA | other | upstream | 474376 | 42490558 ~ 42491172 (-) |
| LOC110486438 | LOC106601158 | other | upstream | 786262 | 42801570 ~ 42809120 (-) |
