Gene
RNA
| Item | Value |
|---|---|
| gene id | G1176148 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 42285190 ~ 42285403 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1341208 | True | 214 | lncRNA | 0.46 | 1 | 42285190 | 42285403 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486400 | LOC106601255 | coding | downstream | 269284 | 42007646 ~ 42015906 (-) |
| LOC110487541 | LOC106607111 | coding | downstream | 421381 | 41862761 ~ 41863809 (-) |
| LOC110486396 | LOC106601258 | coding | downstream | 427564 | 41776509 ~ 41857626 (-) |
| rl23 | rl23 | coding | downstream | 552201 | 41730039 ~ 41732989 (-) |
| LOC110486390 | LOC106607189 | coding | downstream | 609292 | 41665511 ~ 41675898 (-) |
| LOC118938459 | NA | coding | upstream | 65125 | 42350528 ~ 42357245 (-) |
| LOC110486410 | LOC106607167 | coding | upstream | 110399 | 42395802 ~ 42424908 (-) |
| LOC110486411 | LOC106607168 | coding | upstream | 140973 | 42426376 ~ 42435161 (-) |
| LOC110486413 | rbx1 | coding | upstream | 167691 | 42453094 ~ 42456995 (-) |
| LOC110487542 | LOC106607166 | coding | upstream | 183853 | 42469256 ~ 42477053 (-) |
| G1176146 | NA | non-coding | downstream | 3846 | 42281131 ~ 42281344 (-) |
| G1176145 | NA | non-coding | downstream | 7187 | 42277731 ~ 42278003 (-) |
| G1176139 | NA | non-coding | downstream | 11882 | 42272912 ~ 42273308 (-) |
| G1176138 | NA | non-coding | downstream | 12455 | 42272452 ~ 42272735 (-) |
| G1176130 | NA | non-coding | downstream | 22236 | 42262720 ~ 42262954 (-) |
| G1176150 | NA | non-coding | upstream | 1464 | 42286867 ~ 42287075 (-) |
| G1176158 | NA | non-coding | upstream | 30359 | 42315762 ~ 42315973 (-) |
| G1176159 | NA | non-coding | upstream | 31241 | 42316644 ~ 42322827 (-) |
| G1176161 | NA | non-coding | upstream | 31668 | 42317071 ~ 42323223 (-) |
| G1176165 | LOC105030512 | non-coding | upstream | 43345 | 42328748 ~ 42329046 (-) |
| G1175906 | NA | other | downstream | 285099 | 41999352 ~ 42000091 (-) |
| G1175904 | LOC106607178 | other | downstream | 287553 | 41997314 ~ 41997637 (-) |
| col5a3a | LOC106607203 | other | downstream | 993396 | 41282052 ~ 41362985 (-) |
| LOC110486364 | LOC106601288 | other | downstream | 1450554 | 40831402 ~ 40843483 (-) |
| G1174741 | NA | other | downstream | 1827509 | 40456895 ~ 40457681 (-) |
| G1176164 | NA | other | upstream | 42641 | 42328044 ~ 42328572 (-) |
| G1176749 | NA | other | upstream | 205155 | 42490558 ~ 42491172 (-) |
| LOC110486438 | LOC106601158 | other | upstream | 517041 | 42801570 ~ 42809120 (-) |
