Gene
RNA
| Item | Value |
|---|---|
| gene id | G1176161 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 42317071 ~ 42323223 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1341224 | True | 318 | lncRNA | 0.43 | 2 | 42317071 | 42323223 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486406 | LOC106607173 | coding | downstream | 25094 | 42210222 ~ 42291977 (-) |
| LOC110486400 | LOC106601255 | coding | downstream | 301165 | 42007646 ~ 42015906 (-) |
| LOC110487541 | LOC106607111 | coding | downstream | 453262 | 41862761 ~ 41863809 (-) |
| LOC110486396 | LOC106601258 | coding | downstream | 459445 | 41776509 ~ 41857626 (-) |
| rl23 | rl23 | coding | downstream | 584082 | 41730039 ~ 41732989 (-) |
| LOC118938459 | NA | coding | upstream | 27305 | 42350528 ~ 42357245 (-) |
| LOC110486410 | LOC106607167 | coding | upstream | 72579 | 42395802 ~ 42424908 (-) |
| LOC110486411 | LOC106607168 | coding | upstream | 103153 | 42426376 ~ 42435161 (-) |
| LOC110486413 | rbx1 | coding | upstream | 129871 | 42453094 ~ 42456995 (-) |
| LOC110487542 | LOC106607166 | coding | upstream | 146033 | 42469256 ~ 42477053 (-) |
| G1176158 | NA | non-coding | downstream | 1098 | 42315762 ~ 42315973 (-) |
| G1176150 | NA | non-coding | downstream | 29996 | 42286867 ~ 42287075 (-) |
| G1176148 | NA | non-coding | downstream | 31668 | 42285190 ~ 42285403 (-) |
| G1176146 | NA | non-coding | downstream | 35727 | 42281131 ~ 42281344 (-) |
| G1176145 | NA | non-coding | downstream | 39068 | 42277731 ~ 42278003 (-) |
| G1176165 | LOC105030512 | non-coding | upstream | 5525 | 42328748 ~ 42329046 (-) |
| G1176170 | NA | non-coding | upstream | 14133 | 42337356 ~ 42337594 (-) |
| G1176678 | NA | non-coding | upstream | 31101 | 42354324 ~ 42354523 (-) |
| G1176687 | NA | non-coding | upstream | 38870 | 42362093 ~ 42362331 (-) |
| G1176693 | NA | non-coding | upstream | 71563 | 42394786 ~ 42395694 (-) |
| G1175906 | NA | other | downstream | 316980 | 41999352 ~ 42000091 (-) |
| G1175904 | LOC106607178 | other | downstream | 319434 | 41997314 ~ 41997637 (-) |
| col5a3a | LOC106607203 | other | downstream | 1025277 | 41282052 ~ 41362985 (-) |
| LOC110486364 | LOC106601288 | other | downstream | 1482435 | 40831402 ~ 40843483 (-) |
| G1174741 | NA | other | downstream | 1859390 | 40456895 ~ 40457681 (-) |
| G1176164 | NA | other | upstream | 4821 | 42328044 ~ 42328572 (-) |
| G1176749 | NA | other | upstream | 167335 | 42490558 ~ 42491172 (-) |
| LOC110486438 | LOC106601158 | other | upstream | 479221 | 42801570 ~ 42809120 (-) |
