G1176723


Basic Information

Item Value
gene id G1176723
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 42458514 ~ 42489788 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1341915
tgtgttcagggtgatgagctgtgttgcttttacgccaaatataacgtcttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaactacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatgactgactgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgttactccttccatttcaatattattgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccagctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttgacggacctctgagactatcacagtgcaggtgcatttatacggtgacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataatttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaatcaaTGTCTTCAtcctcttcatgattgtgtcccacttgttgttgattcttcacaaaaaaattaagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgta

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1341915 True 919 lncRNA 0.42 2 42458514 42489788

Neighbor

gene id symbol gene type direction distance location
LOC110486413 rbx1 coding downstream 1519 42453094 ~ 42456995 (-)
LOC110486411 LOC106607168 coding downstream 23353 42426376 ~ 42435161 (-)
LOC110486410 LOC106607167 coding downstream 33606 42395802 ~ 42424908 (-)
LOC118938459 NA coding downstream 101269 42350528 ~ 42357245 (-)
LOC110486406 LOC106607173 coding downstream 166537 42210222 ~ 42291977 (-)
LOC110486417 LOC106607161 coding upstream 46645 42536433 ~ 42543540 (-)
LOC110486421 LOC106601236 coding upstream 83011 42572799 ~ 42588640 (-)
LOC118938457 LOC106607157 coding upstream 120090 42609878 ~ 42612424 (-)
plbd1 plbl1 coding upstream 122839 42612627 ~ 42616732 (-)
trnar-ccu-48 NA coding upstream 129453 42619241 ~ 42619313 (-)
G1176718 NA non-coding downstream 14290 42443915 ~ 42444224 (-)
G1176714 NA non-coding downstream 41400 42416887 ~ 42417114 (-)
G1176693 NA non-coding downstream 62820 42394786 ~ 42395694 (-)
G1176687 NA non-coding downstream 96183 42362093 ~ 42362331 (-)
G1176750 NA non-coding upstream 1551 42491339 ~ 42491598 (-)
G1176751 NA non-coding upstream 2628 42492416 ~ 42492745 (-)
G1176754 NA non-coding upstream 6609 42496397 ~ 42496837 (-)
G1176757 NA non-coding upstream 24685 42514473 ~ 42514700 (-)
G1176760 NA non-coding upstream 29635 42519423 ~ 42519650 (-)
G1176164 NA other downstream 129942 42328044 ~ 42328572 (-)
G1175906 NA other downstream 458423 41999352 ~ 42000091 (-)
G1175904 LOC106607178 other downstream 460877 41997314 ~ 41997637 (-)
col5a3a LOC106607203 other downstream 1166720 41282052 ~ 41362985 (-)
G1176749 NA other upstream 770 42490558 ~ 42491172 (-)
LOC110486438 LOC106601158 other upstream 312656 42801570 ~ 42809120 (-)
G1177025 NA other upstream 514968 43004756 ~ 43007324 (-)
G1177027 NA other upstream 517591 43007379 ~ 43007758 (-)
G1176972 LOC106607127 other upstream 549386 43039174 ~ 43049544 (-)

Expression


Co-expression Network