Gene
RNA
| Item | Value |
|---|---|
| gene id | G1176774 |
| gene name | LOC106607160 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 42549877 ~ 42550622 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| aconitate hydratase, mitochondrial-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1341969 | True | 495 | lncRNA | 0.49 | 3 | 42549877 | 42550622 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486417 | LOC106607161 | coding | downstream | 6337 | 42536433 ~ 42543540 (-) |
| LOC110486414 | LOC106607164 | coding | downstream | 65273 | 42479024 ~ 42484604 (-) |
| LOC110487542 | LOC106607166 | coding | downstream | 72824 | 42469256 ~ 42477053 (-) |
| LOC110486413 | rbx1 | coding | downstream | 92882 | 42453094 ~ 42456995 (-) |
| LOC110486411 | LOC106607168 | coding | downstream | 114716 | 42426376 ~ 42435161 (-) |
| LOC110486421 | LOC106601236 | coding | upstream | 22177 | 42572799 ~ 42588640 (-) |
| LOC118938457 | LOC106607157 | coding | upstream | 59256 | 42609878 ~ 42612424 (-) |
| plbd1 | plbl1 | coding | upstream | 62005 | 42612627 ~ 42616732 (-) |
| trnar-ccu-48 | NA | coding | upstream | 68619 | 42619241 ~ 42619313 (-) |
| LOC110486423 | pick1 | coding | upstream | 72028 | 42622650 ~ 42631097 (-) |
| G1176760 | NA | non-coding | downstream | 30227 | 42519423 ~ 42519650 (-) |
| G1176757 | NA | non-coding | downstream | 35177 | 42514473 ~ 42514700 (-) |
| G1176754 | NA | non-coding | downstream | 53040 | 42496397 ~ 42496837 (-) |
| G1176751 | NA | non-coding | downstream | 57132 | 42492416 ~ 42492745 (-) |
| G1176775 | NA | non-coding | upstream | 2571 | 42553193 ~ 42556101 (-) |
| G1176804 | NA | non-coding | upstream | 41034 | 42591656 ~ 42592076 (-) |
| G1176807 | NA | non-coding | upstream | 42910 | 42593532 ~ 42593985 (-) |
| G1176849 | NA | non-coding | upstream | 150568 | 42701190 ~ 42701451 (-) |
| G1176866 | LOC106607146 | non-coding | upstream | 197646 | 42748268 ~ 42752093 (-) |
| G1176749 | NA | other | downstream | 58705 | 42490558 ~ 42491172 (-) |
| G1176164 | NA | other | downstream | 221305 | 42328044 ~ 42328572 (-) |
| G1175906 | NA | other | downstream | 549786 | 41999352 ~ 42000091 (-) |
| LOC110486438 | LOC106601158 | other | upstream | 251822 | 42801570 ~ 42809120 (-) |
| G1177025 | NA | other | upstream | 454134 | 43004756 ~ 43007324 (-) |
| G1177027 | NA | other | upstream | 456757 | 43007379 ~ 43007758 (-) |
| G1176972 | LOC106607127 | other | upstream | 488552 | 43039174 ~ 43049544 (-) |
| G1177047 | NA | other | upstream | 508808 | 43059430 ~ 43076353 (-) |
