G1176382


Basic Information

Item Value
gene id G1176382
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 42760920 ~ 42761329 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1341491
TGTTTTTTGGGTAACCCGTTTGTGGTCTCAAAGATGGTAAAGGACGTATTGGAAAAAGTGGAGTCGGTCAGCGTGACCAGAAGTggacctgagccctaggaccatacctcaggactacctgacatgatgactccttgctgtccccagtccacctggccatgctgctgctccagtttcaactgttctgccttattattattggaccgtgctggtcatttatgaacatcttggccatgttctgttataatctccccccggcacagccagaagaggactggccaccccacatagcctggttcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1341491 True 300 lncRNA 0.51 2 42760920 42761329

Neighbor

gene id symbol gene type direction distance location
LOC110486431 LOC106601226 coding upstream 10571 42735313 ~ 42750349 (+)
LOC110486430 LOC106601228 coding upstream 26339 42725254 ~ 42734581 (+)
LOC110486429 LOC106607147 coding upstream 36544 42700605 ~ 42724376 (+)
LOC110486428 LOC106607148 coding upstream 63338 42685677 ~ 42697582 (+)
LOC110486426 NA coding upstream 109644 42649637 ~ 42651276 (+)
LOC110486435 LOC106601225 coding downstream 1091 42762420 ~ 42781242 (+)
LOC110486433 LOC106607143 coding downstream 26310 42787639 ~ 42794171 (+)
LOC110486436 LOC106601222 coding downstream 33279 42794608 ~ 42797362 (+)
LOC110486440 LOC106601218 coding downstream 100781 42862110 ~ 42866316 (+)
LOC110485180 LOC106607135 coding downstream 120627 42881956 ~ 42911227 (+)
G1176381 NA non-coding upstream 616 42760005 ~ 42760304 (+)
G1176380 NA non-coding upstream 2309 42758286 ~ 42758611 (+)
G1176371 NA non-coding upstream 25722 42734999 ~ 42735198 (+)
G1176334 NA non-coding upstream 26013 42634554 ~ 42734907 (+)
G1176398 NA non-coding downstream 67107 42828436 ~ 42831752 (+)
G1176408 NA non-coding downstream 95389 42856718 ~ 42857103 (+)
G1176410 NA non-coding downstream 109052 42870381 ~ 42870601 (+)
G1176412 NA non-coding downstream 112856 42874185 ~ 42874468 (+)
nol12 LOC106607131 non-coding downstream 189790 42951079 ~ 42953306 (+)
G1176278 LOC106607164 other upstream 276400 42482377 ~ 42484520 (+)
G1176084 LOC106607173 other upstream 469054 42289091 ~ 42291866 (+)
G1175667 NA other upstream 834264 41926275 ~ 41926656 (+)
G1175346 NA other upstream 901577 41857189 ~ 41859343 (+)
LOC110486447 LOC106607129 other downstream 204164 42963102 ~ 42990476 (+)
LOC110485182 LOC106607095 other downstream 497846 43259175 ~ 43265600 (+)
LOC110486464 mgp other downstream 636420 43397744 ~ 43402308 (+)
LOC110486465 bglap other downstream 644839 43406158 ~ 43407943 (+)
G1177750 NA other downstream 1357549 44118878 ~ 44121922 (+)

Expression


Co-expression Network