Gene
RNA
| Item | Value |
|---|---|
| gene id | G1176903 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 42792501 ~ 42793303 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: MICAL-like protein 1 isoform X5 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1342110 | True | 405 | lncRNA | 0.51 | 4 | 42792501 | 42793303 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486434 | LOC106607145 | coding | downstream | 4862 | 42781521 ~ 42787639 (-) |
| LOC110486427 | LOC106607149 | coding | downstream | 126487 | 42655821 ~ 42666014 (-) |
| LOC110486424 | LOC106607151 | coding | downstream | 138073 | 42634553 ~ 42654428 (-) |
| LOC110486423 | pick1 | coding | downstream | 161404 | 42622650 ~ 42631097 (-) |
| trnar-ccu-48 | NA | coding | downstream | 173188 | 42619241 ~ 42619313 (-) |
| LOC110486438 | LOC106601158 | coding | upstream | 8267 | 42801570 ~ 42809120 (-) |
| LOC110486437 | LOC106607139 | coding | upstream | 40251 | 42833554 ~ 42855208 (-) |
| LOC110486439 | LOC106601217 | coding | upstream | 73544 | 42866847 ~ 42869075 (-) |
| LOC110486441 | LOC106607136 | coding | upstream | 77599 | 42870902 ~ 42880838 (-) |
| fam234b | LOC106607128 | coding | upstream | 200339 | 42993642 ~ 43003153 (-) |
| G1176873 | NA | non-coding | downstream | 35212 | 42757065 ~ 42757289 (-) |
| G1176867 | NA | non-coding | downstream | 39679 | 42752153 ~ 42752822 (-) |
| G1176866 | LOC106607146 | non-coding | downstream | 40408 | 42748268 ~ 42752093 (-) |
| G1176849 | NA | non-coding | downstream | 91050 | 42701190 ~ 42701451 (-) |
| G1176807 | NA | non-coding | downstream | 198516 | 42593532 ~ 42593985 (-) |
| G1176881 | NA | non-coding | upstream | 3247 | 42796550 ~ 42811883 (-) |
| G1176907 | NA | non-coding | upstream | 17934 | 42811237 ~ 42846179 (-) |
| G1176925 | NA | non-coding | upstream | 62408 | 42855711 ~ 42855982 (-) |
| G1176927 | NA | non-coding | upstream | 64820 | 42858123 ~ 42858337 (-) |
| G1176928 | NA | non-coding | upstream | 66493 | 42859796 ~ 42860001 (-) |
| G1176749 | NA | other | downstream | 301329 | 42490558 ~ 42491172 (-) |
| LOC110487542 | LOC106607166 | other | downstream | 320523 | 42469256 ~ 42477053 (-) |
| LOC110486413 | rbx1 | other | downstream | 335555 | 42453094 ~ 42456995 (-) |
| G1176164 | NA | other | downstream | 463929 | 42328044 ~ 42328572 (-) |
| G1175906 | NA | other | downstream | 792410 | 41999352 ~ 42000091 (-) |
| G1177025 | NA | other | upstream | 211453 | 43004756 ~ 43007324 (-) |
| G1177027 | NA | other | upstream | 214076 | 43007379 ~ 43007758 (-) |
| G1176972 | LOC106607127 | other | upstream | 245871 | 43039174 ~ 43049544 (-) |
| G1177047 | NA | other | upstream | 266127 | 43059430 ~ 43076353 (-) |
