G1177033



Basic Information


Item Value
gene id G1177033
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43018091 ~ 43018343 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1342261
ATGTAATAGTATTTATTTACAATTGATGTCCTTagccctgggcaacatgggccaaGGGAGGCTCAGGGATATTGGTATTCACAGTATGCCAccatttatacatttttaaactCAATACTATTCCCAAATTAAAGCTTTAAAACAGCAGCTTGCTCTCTGCCTCATGGCAGAACGTGTAGAATTACATAATAGCTTTAAAGCTGGAACAAAAcatctgccccatgacaaaattaAAATGGCTACATTTTCTCTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1342261 True 253 lncRNA 0.38 1 43018091 43018343

Neighbor


gene id symbol gene type direction distance location
LOC118938563 NA coding downstream 6437 43011500 ~ 43011654 (-)
fam234b LOC106607128 coding downstream 14938 42993642 ~ 43003153 (-)
LOC110486441 LOC106607136 coding downstream 137253 42870902 ~ 42880838 (-)
LOC110486439 LOC106601217 coding downstream 149016 42866847 ~ 42869075 (-)
LOC110486437 LOC106607139 coding downstream 162883 42833554 ~ 42855208 (-)
LOC110486451 LOC106607121 coding upstream 2604 43019077 ~ 43025709 (-)
LOC110486454 LOC106607126 coding upstream 14167 43032510 ~ 43039209 (-)
fmc1 LOC106607127 coding upstream 21151 43039494 ~ 43049749 (-)
LOC118938293 LOC106562616 coding upstream 35326 43053669 ~ 43065887 (-)
LOC110486458 LOC106601205 coding upstream 247436 43265779 ~ 43272054 (-)
G1177029 NA non-coding downstream 8718 43009040 ~ 43009373 (-)
G1177028 NA non-coding downstream 10022 43007790 ~ 43008069 (-)
G1176928 NA non-coding downstream 158090 42859796 ~ 42860001 (-)
G1176927 NA non-coding downstream 159754 42858123 ~ 42858337 (-)
G1177039 NA non-coding upstream 32053 43050396 ~ 43050602 (-)
G1177040 NA non-coding upstream 33148 43051491 ~ 43051871 (-)
G1177056 NA non-coding upstream 50739 43069082 ~ 43069560 (-)
G1177027 NA other downstream 10333 43007379 ~ 43007758 (-)
G1177025 NA other downstream 10767 43004756 ~ 43007324 (-)
LOC110486438 LOC106601158 other downstream 209011 42801570 ~ 42809120 (-)
G1176749 NA other downstream 526919 42490558 ~ 42491172 (-)
LOC110487542 LOC106607166 other downstream 546113 42469256 ~ 42477053 (-)
G1176972 LOC106607127 other upstream 20831 43039174 ~ 43049544 (-)
G1177047 NA other upstream 41087 43059430 ~ 43076353 (-)
G1177175 NA other upstream 334158 43352501 ~ 43362354 (-)
G1177238 LOC106607096 other upstream 395816 43414159 ~ 43415103 (-)
G1177552 NA other upstream 583020 43601363 ~ 43647736 (-)

Expression



Co-expression Network