G1176482


Basic Information

Item Value
gene id G1176482
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43024032 ~ 43024434 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1341619
GGGAGAATGTTTGCCTGTAATCTTTGGATGCAGTTCCTCAACCTCTACCTCATAGCTTACAACATCCCCATTCACATCATCTTTGTGCCACACTCCCTCACTCCGATTTTAAAGACAGCTGTATCTGCAGAGGTAGCTACAGGAGAGCACTGTGGCTGACCCTTGACGGCAAGGTTGTTGGGGTTGATTGGGGGGTCAGTGTCTGTTGCCTTCACAGAGAACACAAAATGGCCATCCAGAGAACAGG

Function

NR:

description
zona pellucida sperm-binding protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1341619 True 247 lncRNA 0.49 2 43024032 43024434

Neighbor

gene id symbol gene type direction distance location
rrp7a zg14 coding upstream 3407 43018526 ~ 43020625 (+)
LOC110486450 LOC100380702 coding upstream 6243 43011969 ~ 43017789 (+)
LOC118938458 NA coding upstream 22748 43000710 ~ 43001284 (+)
ndufa6 ndua6 coding upstream 30724 42990701 ~ 42993308 (+)
LOC110486447 LOC106607129 coding upstream 33556 42963102 ~ 42990476 (+)
wbp2nl wbp2 coding downstream 2580 43027014 ~ 43032851 (+)
LOC110486456 LOC106601209 coding downstream 43051 43067485 ~ 43079588 (+)
LOC110485181 grin2b coding downstream 55357 43079791 ~ 43219400 (+)
tcf20 LOC106601207 coding downstream 203395 43227829 ~ 43252961 (+)
LOC110485182 LOC106607095 coding downstream 237340 43259175 ~ 43265600 (+)
G1176475 NA non-coding upstream 14406 43009315 ~ 43009626 (+)
G1176460 NA non-coding upstream 58985 42964803 ~ 42965047 (+)
G1176459 NA non-coding upstream 59494 42964333 ~ 42964538 (+)
G1176458 NA non-coding upstream 62305 42961488 ~ 42961727 (+)
nol12 LOC106607131 non-coding upstream 70740 42951079 ~ 42953306 (+)
G1176484 NA non-coding downstream 1329 43025763 ~ 43026230 (+)
G1176486 LOC106601210 non-coding downstream 9769 43034203 ~ 43035231 (+)
G1176504 NA non-coding downstream 26876 43051310 ~ 43051602 (+)
G1176505 NA non-coding downstream 28416 43052850 ~ 43053093 (+)
G1176506 NA non-coding downstream 29722 43054156 ~ 43054361 (+)
LOC110486430 LOC106601228 other upstream 293921 42725254 ~ 42734581 (+)
G1176278 LOC106607164 other upstream 539512 42482377 ~ 42484520 (+)
G1176084 LOC106607173 other upstream 732166 42289091 ~ 42291866 (+)
G1175667 NA other upstream 1097376 41926275 ~ 41926656 (+)
LOC110486464 mgp other downstream 373315 43397744 ~ 43402308 (+)
LOC110486465 bglap other downstream 381734 43406158 ~ 43407943 (+)
G1177750 NA other downstream 1094444 44118878 ~ 44121922 (+)
LOC110486491 LOC106607082 other downstream 1149950 44174050 ~ 44211083 (+)

Expression


Co-expression Network