G1176486 (LOC106601210)


Basic Information

Item Value
gene id G1176486
gene name LOC106601210
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43034203 ~ 43035231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1341624
AGTAGACAGTCATGCCGGGTCGATCCTCGATTCTGATGGCACTGTCGATGGGTACAGGGGGACTGACTTGGTAGTTGGTGGGAATCCTGAGGCTAACCACCAGACGGCGTGACATCACACCATCGTCCCTGGGATATACTGTGATGATAACCGGTGCTGTCGTCCCCATTGCCTCCCcTTGGTCGTTGCTTCCCCCAATGTACACGAGAAGCTTCCTCACTAGCTCCCCCATCACCTGGTCAAAGGTCCGCCCCTCTGAGCTCACTGAGGCATACTTTGCACCATCGTACCTCCGCACCTCGTAGCTGACCCCGTCCTGGGGAAGAGAGCAGGAGGCAAAACGTGATTCACCAATGACACACGTTGACAAACTGTTCAGAGGGAAGGACGCCACACACTACTTGGGGGTTAGAGGGGGGTGGGGCTGGGGGTGCAGTGATTGGCGATATGCAATGGGCAGAATCTGTG

Function

NR:

description
heme-binding protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1341624 True 468 lncRNA 0.56 2 43034203 43035231

Neighbor

gene id symbol gene type direction distance location
wbp2nl wbp2 coding upstream 1352 43027014 ~ 43032851 (+)
rrp7a zg14 coding upstream 13578 43018526 ~ 43020625 (+)
LOC110486450 LOC100380702 coding upstream 16414 43011969 ~ 43017789 (+)
LOC118938458 NA coding upstream 32919 43000710 ~ 43001284 (+)
ndufa6 ndua6 coding upstream 40895 42990701 ~ 42993308 (+)
LOC110486456 LOC106601209 coding downstream 32254 43067485 ~ 43079588 (+)
LOC110485181 grin2b coding downstream 44560 43079791 ~ 43219400 (+)
tcf20 LOC106601207 coding downstream 192598 43227829 ~ 43252961 (+)
LOC110485182 LOC106607095 coding downstream 226543 43259175 ~ 43265600 (+)
LOC118938568 NA coding downstream 242392 43277623 ~ 43277680 (+)
G1176484 NA non-coding upstream 7973 43025763 ~ 43026230 (+)
G1176482 NA non-coding upstream 9769 43024032 ~ 43024434 (+)
G1176475 NA non-coding upstream 24577 43009315 ~ 43009626 (+)
G1176460 NA non-coding upstream 69156 42964803 ~ 42965047 (+)
G1176459 NA non-coding upstream 69665 42964333 ~ 42964538 (+)
G1176504 NA non-coding downstream 16079 43051310 ~ 43051602 (+)
G1176505 NA non-coding downstream 17619 43052850 ~ 43053093 (+)
G1176506 NA non-coding downstream 18925 43054156 ~ 43054361 (+)
G1176522 NA non-coding downstream 54136 43089367 ~ 43089581 (+)
G1176526 NA non-coding downstream 57490 43092721 ~ 43093027 (+)
LOC110486447 LOC106607129 other upstream 61992 42963102 ~ 42990476 (+)
LOC110486430 LOC106601228 other upstream 304092 42725254 ~ 42734581 (+)
G1176278 LOC106607164 other upstream 549683 42482377 ~ 42484520 (+)
G1176084 LOC106607173 other upstream 742337 42289091 ~ 42291866 (+)
G1175667 NA other upstream 1107547 41926275 ~ 41926656 (+)
LOC110486464 mgp other downstream 362518 43397744 ~ 43402308 (+)
LOC110486465 bglap other downstream 370937 43406158 ~ 43407943 (+)
G1177750 NA other downstream 1083647 44118878 ~ 44121922 (+)
LOC110486491 LOC106607082 other downstream 1139153 44174050 ~ 44211083 (+)

Expression


Co-expression Network