G1177040



Basic Information


Item Value
gene id G1177040
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43051491 ~ 43051871 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1342268
gggcgctgtactgcagcgccagctgtgccatcagagtccctgggttcgtgcccaggctctgtcgtaaccggccgcgaccgggaggtccgtggggcgacgcacaattggcctagcgtcgtccgggttagggagggcttggtcggtagggatgtccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcgcgctaaccaaggttgccaggtgcacagtatttcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtgcggctggttgggttgtgtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacggaagttgtagcgatgagac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1342268 True 381 lncRNA 0.63 1 43051491 43051871

Neighbor


gene id symbol gene type direction distance location
fmc1 LOC106607127 coding downstream 1742 43039494 ~ 43049749 (-)
LOC110486454 LOC106607126 coding downstream 12282 43032510 ~ 43039209 (-)
LOC110486451 LOC106607121 coding downstream 25782 43019077 ~ 43025709 (-)
LOC118938563 NA coding downstream 39837 43011500 ~ 43011654 (-)
fam234b LOC106607128 coding downstream 48338 42993642 ~ 43003153 (-)
LOC118938293 LOC106562616 coding upstream 1798 43053669 ~ 43065887 (-)
LOC110486458 LOC106601205 coding upstream 213908 43265779 ~ 43272054 (-)
LOC110486460 LOC106607104 coding upstream 233885 43285756 ~ 43297849 (-)
LOC110486463 LOC106607099 coding upstream 294907 43346778 ~ 43353148 (-)
LOC110487544 NA coding upstream 303858 43355729 ~ 43362239 (-)
G1177039 NA non-coding downstream 889 43050396 ~ 43050602 (-)
G1177033 NA non-coding downstream 33148 43018091 ~ 43018343 (-)
G1177029 NA non-coding downstream 42118 43009040 ~ 43009373 (-)
G1177028 NA non-coding downstream 43422 43007790 ~ 43008069 (-)
G1177056 NA non-coding upstream 17211 43069082 ~ 43069560 (-)
G1177063 LOC106601209 non-coding upstream 26011 43077882 ~ 43079581 (-)
G1177064 NA non-coding upstream 28308 43080179 ~ 43080537 (-)
G1177068 NA non-coding upstream 33281 43085152 ~ 43085385 (-)
G1176972 LOC106607127 other downstream 1947 43039174 ~ 43049544 (-)
G1177027 NA other downstream 43733 43007379 ~ 43007758 (-)
G1177025 NA other downstream 44167 43004756 ~ 43007324 (-)
LOC110486438 LOC106601158 other downstream 242411 42801570 ~ 42809120 (-)
G1176749 NA other downstream 560319 42490558 ~ 42491172 (-)
G1177047 NA other upstream 7559 43059430 ~ 43076353 (-)
G1177175 NA other upstream 300630 43352501 ~ 43362354 (-)
G1177238 LOC106607096 other upstream 362288 43414159 ~ 43415103 (-)
G1177552 NA other upstream 549492 43601363 ~ 43647736 (-)
G1177709 LOC106601291 other upstream 921668 43973539 ~ 43974057 (-)

Expression



Co-expression Network