G1176585


Basic Information

Item Value
gene id G1176585
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43255208 ~ 43255620 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1341726
agcgaacggttgaaaagcatgcatttggttttactagcgtttaagagcagttggaggccatggaaggagtgttgtatggcgttgaagctcgtttggaggttagatagcacagtgtccaaggaagggccggaagtatacagaatggtgtcgtctgcgtagaggtggatcagggaatcgcccgcagcaagagcaacatcattgatatatacagagaaaagagtcagcccgagaattgaaccctgtggcacccccatagagactgccagaggaccggacaacatgccctccgatttgacacactgaactctgtctgcaaagtagttggtgaaccaggcaaggcagtcattagaaaaaccgaggctactgagtctgccaataagaatatgtttgacagagtcgaaagccttggccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1341726 True 413 lncRNA 0.49 1 43255208 43255620

Neighbor

gene id symbol gene type direction distance location
tcf20 LOC106601207 coding upstream 2247 43227829 ~ 43252961 (+)
LOC110485181 grin2b coding upstream 35808 43079791 ~ 43219400 (+)
LOC110486456 LOC106601209 coding upstream 175620 43067485 ~ 43079588 (+)
wbp2nl wbp2 coding upstream 222357 43027014 ~ 43032851 (+)
rrp7a zg14 coding upstream 234583 43018526 ~ 43020625 (+)
LOC110485182 LOC106607095 coding downstream 6154 43259175 ~ 43265600 (+)
LOC118938568 NA coding downstream 22003 43277623 ~ 43277680 (+)
LOC110486461 LOC106607100 coding downstream 52748 43308368 ~ 43347397 (+)
LOC110486464 mgp coding downstream 142124 43397744 ~ 43402308 (+)
LOC110486465 bglap coding downstream 150538 43406158 ~ 43407943 (+)
G1176555 NA non-coding upstream 95778 43158903 ~ 43159430 (+)
G1176526 NA non-coding upstream 162181 43092721 ~ 43093027 (+)
G1176522 NA non-coding upstream 165627 43089367 ~ 43089581 (+)
G1176586 NA non-coding downstream 725 43256345 ~ 43256647 (+)
G1176587 NA non-coding downstream 1070 43256690 ~ 43256934 (+)
G1176596 NA non-coding downstream 10153 43265773 ~ 43267274 (+)
G1176607 NA non-coding downstream 17415 43273035 ~ 43273254 (+)
LOC110486447 LOC106607129 other upstream 282997 42963102 ~ 42990476 (+)
LOC110486430 LOC106601228 other upstream 525097 42725254 ~ 42734581 (+)
G1176278 LOC106607164 other upstream 770688 42482377 ~ 42484520 (+)
G1176084 LOC106607173 other upstream 963342 42289091 ~ 42291866 (+)
G1175667 NA other upstream 1328552 41926275 ~ 41926656 (+)
G1177750 NA other downstream 863258 44118878 ~ 44121922 (+)
LOC110486491 LOC106607082 other downstream 918764 44174050 ~ 44211083 (+)

Expression


Co-expression Network