G1176587


Basic Information

Item Value
gene id G1176587
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43256690 ~ 43256934 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1341728
caacattccacaggtcacaatcaacagcctgatcaactctatttgAAGGAAATGTGTTgcgttgcatgaggcaaatggtggtcaaacCAGTTactgactgtttttctgatccttgccccagtcatgtgaaagccatagattagaatttatttaaattgactgatttctttatatgaactgtaactacagtgccttgcgaaagtattctgcccccttgaactttgcgaccttttgccacatttcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1341728 True 245 lncRNA 0.40 1 43256690 43256934

Neighbor

gene id symbol gene type direction distance location
tcf20 LOC106601207 coding upstream 3729 43227829 ~ 43252961 (+)
LOC110485181 grin2b coding upstream 37290 43079791 ~ 43219400 (+)
LOC110486456 LOC106601209 coding upstream 177102 43067485 ~ 43079588 (+)
wbp2nl wbp2 coding upstream 223839 43027014 ~ 43032851 (+)
rrp7a zg14 coding upstream 236065 43018526 ~ 43020625 (+)
LOC110485182 LOC106607095 coding downstream 4840 43259175 ~ 43265600 (+)
LOC118938568 NA coding downstream 20689 43277623 ~ 43277680 (+)
LOC110486461 LOC106607100 coding downstream 51434 43308368 ~ 43347397 (+)
LOC110486464 mgp coding downstream 140810 43397744 ~ 43402308 (+)
LOC110486465 bglap coding downstream 149224 43406158 ~ 43407943 (+)
G1176586 NA non-coding upstream 43 43256345 ~ 43256647 (+)
G1176585 NA non-coding upstream 1070 43255208 ~ 43255620 (+)
G1176555 NA non-coding upstream 97260 43158903 ~ 43159430 (+)
G1176596 NA non-coding downstream 8839 43265773 ~ 43267274 (+)
G1176607 NA non-coding downstream 16101 43273035 ~ 43273254 (+)
G1176612 NA non-coding downstream 23979 43280913 ~ 43281240 (+)
G1176617 NA non-coding downstream 27572 43284506 ~ 43284777 (+)
LOC110486447 LOC106607129 other upstream 284479 42963102 ~ 42990476 (+)
LOC110486430 LOC106601228 other upstream 526579 42725254 ~ 42734581 (+)
G1176278 LOC106607164 other upstream 772170 42482377 ~ 42484520 (+)
G1176084 LOC106607173 other upstream 964824 42289091 ~ 42291866 (+)
G1175667 NA other upstream 1330034 41926275 ~ 41926656 (+)
G1177750 NA other downstream 861944 44118878 ~ 44121922 (+)
LOC110486491 LOC106607082 other downstream 917450 44174050 ~ 44211083 (+)

Expression


Co-expression Network