G1176612


Basic Information

Item Value
gene id G1176612
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43280913 ~ 43281240 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1341782
gtgttcatttgctaaattgtaattacttcgctactatggcctatttattgccacacaccgtatatagacttttctctattgttgactgtacttttgtttattccatgtgtaactctgttgtttgtgtcgcactgctttgctttatcttggccaggtcgcagttgtaaatgagaacttgttctcaactggcctacctggttaaataaaggtgaaataaaaaaaagaactgcaacgctgctggggttttcataCTCAAAAGTTTCCTGAGTGTATCAAGGATGGttccaccaccaaaaggacatccagccaacttgacacaactgtggga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1341782 True 328 lncRNA 0.40 1 43280913 43281240

Neighbor

gene id symbol gene type direction distance location
LOC118938568 NA coding upstream 3233 43277623 ~ 43277680 (+)
LOC110485182 LOC106607095 coding upstream 15419 43259175 ~ 43265600 (+)
tcf20 LOC106601207 coding upstream 27952 43227829 ~ 43252961 (+)
LOC110485181 grin2b coding upstream 61513 43079791 ~ 43219400 (+)
LOC110486456 LOC106601209 coding upstream 201325 43067485 ~ 43079588 (+)
LOC110486461 LOC106607100 coding downstream 27128 43308368 ~ 43347397 (+)
LOC110486464 mgp coding downstream 116504 43397744 ~ 43402308 (+)
LOC110486465 bglap coding downstream 124918 43406158 ~ 43407943 (+)
LOC110486466 LOC106601201 coding downstream 127493 43408733 ~ 43415132 (+)
ddx47 LOC106607097 coding downstream 134167 43415407 ~ 43418459 (+)
G1176607 NA non-coding upstream 7659 43273035 ~ 43273254 (+)
G1176596 NA non-coding upstream 13639 43265773 ~ 43267274 (+)
G1176587 NA non-coding upstream 23979 43256690 ~ 43256934 (+)
G1176586 NA non-coding upstream 24266 43256345 ~ 43256647 (+)
G1176617 NA non-coding downstream 3266 43284506 ~ 43284777 (+)
G1176601 NA non-coding downstream 4518 43285758 ~ 43296728 (+)
G1176622 NA non-coding downstream 23574 43304814 ~ 43305035 (+)
G1176628 NA non-coding downstream 44847 43326087 ~ 43326608 (+)
LOC110486447 LOC106607129 other upstream 308702 42963102 ~ 42990476 (+)
LOC110486430 LOC106601228 other upstream 550802 42725254 ~ 42734581 (+)
G1176278 LOC106607164 other upstream 796393 42482377 ~ 42484520 (+)
G1176084 LOC106607173 other upstream 989047 42289091 ~ 42291866 (+)
G1177750 NA other downstream 837638 44118878 ~ 44121922 (+)
LOC110486491 LOC106607082 other downstream 893144 44174050 ~ 44211083 (+)
G1178363 NA other downstream 1386828 44668068 ~ 44668459 (+)

Expression


Co-expression Network