G1177507


Basic Information

Item Value
gene id G1177507
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43471406 ~ 43472241 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1342808
TCCACCAGTTCTCCCTCCACCTTGGtctgcttctccttcaccttgACAAGCTCATCGTCCTTGGCCTGCATCTCCTCCTCCTGCCTGGTCACCTGCAGCAGGGGCTTTACCTGGGGGACAGAACAGACCTGGGGTCAGCCACTGTTCAAACGTAGATGACTAGGAGCCTTATCATATAGCTATATAGAGAGACGTGACAATGCTGGTGTTACAAAGACAGATTAgccatatacagtagatatagtgtACTGTAATGGAGACATGCCCACCTTGGTAAAGAGTCTCCACCACTGCCAATGCTTCAGCTTCAGGTAGGCAGAACAGTTCCTCTGAAGCACCTTCAGACAATTCAGTTGCTGCTGCTTCTTAACAAACGCCCTGtcaggtgagagaggggaggcgTGGTCAGACATACTGACCAAGAAGGTCAAAGGAAACATATATCTGTGGCATCTTTCTGTCCTAAGAAGTGTTGTAGTGGTCACGAAAGGAAGGAATTGAGGAAAGGTAAGGCCATTACATATAGAGAACTCACTTGCGGGCCAGGTATCCCCGGCAGACAGACTGGAAGTAGATGATGATGTCTGTGATCTtcaggtctctctcctcctccaggtgaGCCAGCACTCCAGCCCTGAAGAAGATCTTACTCTGACCAATCCTGAACAGATTAGGATCCAACTCCAAGGCTCGGATCTGGAGTGAAAATGGGTCATAGATTTAAATCCAGGGAAGGAAGGCCAAATCATAATAAACAGTGTCATTTAAGCGATGCCCTATAAATACTAAGGAAAAATCATGTCATGGGTGTTTATGAAGTCGATATACATTTAACA

Function

NR:

description
myosin-10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1342808 True 836 lncRNA 0.47 1 43471406 43472241

Neighbor

gene id symbol gene type direction distance location
LOC110487544 NA coding downstream 109167 43355729 ~ 43362239 (-)
LOC110486463 LOC106607099 coding downstream 118258 43346778 ~ 43353148 (-)
LOC110486460 LOC106607104 coding downstream 173557 43285756 ~ 43297849 (-)
LOC110486458 LOC106601205 coding downstream 199352 43265779 ~ 43272054 (-)
LOC118938293 LOC106562616 coding downstream 405519 43053669 ~ 43065887 (-)
LOC118938297 LOC106596055 coding upstream 13441 43485682 ~ 43487100 (-)
LOC118938302 LOC106591500 coding upstream 14861 43487102 ~ 43489593 (-)
LOC118938304 LOC106596055 coding upstream 27559 43499800 ~ 43500729 (-)
LOC118938072 LOC106595933 coding upstream 28573 43500814 ~ 43502295 (-)
LOC110486469 LOC106591500 coding upstream 43181 43515422 ~ 43518265 (-)
G1177237 NA non-coding downstream 63035 43407998 ~ 43408371 (-)
G1177175 NA non-coding downstream 109138 43352501 ~ 43362354 (-)
G1177170 NA non-coding downstream 190766 43280439 ~ 43280640 (-)
G1177162 NA non-coding downstream 197165 43274004 ~ 43274241 (-)
G1177161 NA non-coding downstream 197460 43273708 ~ 43273946 (-)
G1177509 LOC106601199 non-coding upstream 402 43472643 ~ 43473143 (-)
G1177513 NA non-coding upstream 7773 43480014 ~ 43562861 (-)
LOC118938075 LOC106595933 non-coding upstream 81134 43553375 ~ 43622157 (-)
LOC118938078 LOC106595933 non-coding upstream 109634 43581875 ~ 43642076 (-)
G1177553 NA non-coding upstream 137144 43609385 ~ 43624534 (-)
G1177238 LOC106607096 other downstream 56303 43414159 ~ 43415103 (-)
G1177047 NA other downstream 395053 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 421862 43039174 ~ 43049544 (-)
G1177027 NA other downstream 463648 43007379 ~ 43007758 (-)
G1177552 NA other upstream 129122 43601363 ~ 43647736 (-)
G1177709 LOC106601291 other upstream 501298 43973539 ~ 43974057 (-)
zgc:158403 LOC106601368 other upstream 504906 43977147 ~ 43992248 (-)
epor LOC106601362 other upstream 555071 44024053 ~ 44029014 (-)
G1178281 NA other upstream 990713 44462954 ~ 44463226 (-)

Expression


Co-expression Network