G1177614


Basic Information

Item Value
gene id G1177614
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43833450 ~ 43865258 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1342987
GTTCTGTAGAATCCCCCTGCTGTTGTTAATAGTatagtaggtctgttctgtagattccccgtgctgttgttaatgatacagtagttatgttctgtagattccccatgctgttgttaatggtcCAGTTGGTCTGTCCTCTAGATTCCCAGtgctgttgttaatggtacagtaggtctgttctgtagattccaaatgctgttgttattgatacagcAGGTCTGTCCTGTAGATACCCCATGCTGtatttaatgatacagtaggtaaGTTCTGTAGATTCCCTGAGCTTTTgtgaatgatacagtaggtatgtTAAACAGGCACCCCATACTGTTGTTAATAATACAGTAGGTATGTTctttagattccccatgctgttgttaatggtacagtcagtctgttctgtagattccccatgctgtatttaatgatacagtaggtcagtTCTGTAGAGTCCCTGTGCTTTTgtgaatgatacagtaggtatgtTATACAGGCACCCCat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1342987 True 502 lncRNA 0.41 2 43833450 43865258

Neighbor

gene id symbol gene type direction distance location
LOC118938309 LOC106601194 coding downstream 80147 43752130 ~ 43753303 (-)
LOC110486471 LOC106595933 coding downstream 82748 43747528 ~ 43750702 (-)
LOC118938081 LOC106591500 coding downstream 105194 43727232 ~ 43728256 (-)
LOC118938308 LOC106591500 coding downstream 135842 43695000 ~ 43697608 (-)
LOC118938553 LOC106591500 coding downstream 150450 43680432 ~ 43683000 (-)
zgc:158403 LOC106601368 coding upstream 113526 43977147 ~ 43992248 (-)
tspan35 LOC106601289 coding upstream 133194 43998452 ~ 44010679 (-)
LOC110486478 LOC106601191 coding upstream 151332 44016590 ~ 44021722 (-)
epor LOC106601362 coding upstream 158795 44024053 ~ 44029014 (-)
rab3db LOC106601190 coding upstream 164697 44029955 ~ 44043512 (-)
G1177589 NA non-coding downstream 79011 43754123 ~ 43754439 (-)
G1177566 NA non-coding downstream 98529 43701569 ~ 43734921 (-)
G1177564 LOC106601165 non-coding downstream 100357 43673334 ~ 43733093 (-)
G1177561 NA non-coding downstream 143657 43660777 ~ 43689793 (-)
G1177552 NA non-coding downstream 185714 43601363 ~ 43647736 (-)
G1177610 NA non-coding upstream 2931 43868189 ~ 43869339 (-)
G1177641 NA non-coding upstream 9968 43875226 ~ 43878468 (-)
G1177643 NA non-coding upstream 11884 43877142 ~ 43880341 (-)
G1177707 NA non-coding upstream 107890 43973148 ~ 43973355 (-)
G1177719 NA non-coding upstream 130496 43995754 ~ 43995962 (-)
G1177238 LOC106607096 other downstream 418347 43414159 ~ 43415103 (-)
G1177175 NA other downstream 471096 43352501 ~ 43362354 (-)
G1177047 NA other downstream 757097 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 783906 43039174 ~ 43049544 (-)
G1177709 LOC106601291 other upstream 108281 43973539 ~ 43974057 (-)
G1178281 NA other upstream 597696 44462954 ~ 44463226 (-)
LOC110485184 LOC106601341 other upstream 618364 44467268 ~ 44545484 (-)

Expression


Co-expression Network