G1177610


Basic Information

Item Value
gene id G1177610
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 43868189 ~ 43869339 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1342983
tagattccccatgatgttgttaatggtacagttagtctgttctgtagattcccaatgctgttgttaatgatacagtaggtctgttctgtagattccccatgctgttttaAATTACACAGTAGGTCTGCTCTGTAGAtcccccatgctgttgttaatgatacagtagctatgttctgtagattccccatgctgttgttaatgatacagtagctatgttctgtagattccccatgctgttgttaacgATACAGTAgctatgttctgtagattccccatgctgttgttaatgatacagtagctatgttctgtagattccccatgctgttgttaatggtacaggAGGTCTGTTCTATAGATTCCCCATAttgttgttattgatacagttCGTCAGTTCaatagattccccatgctgttgttattgatacagttCGTCAGTTctatagattccccatgctgttgttaatgatacagtaggtatgttctgtagattccccatgatgttgttaatgatacagaacgtctgttctgtagattccccatgctgtttttattgatacagtcagtatgttctgtagattccccatgcttttgttaatgatacagtaggtatgtTCCGTAGATTCCCAGATTCCCaatgctgttgttaatggtacagttAGTCTGTTCGGTAGATTCCcaatgctgttgttaatgatacagttggtatgttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1342983 True 711 lncRNA 0.39 3 43868189 43869339

Neighbor

gene id symbol gene type direction distance location
LOC118938309 LOC106601194 coding downstream 114886 43752130 ~ 43753303 (-)
LOC110486471 LOC106595933 coding downstream 117487 43747528 ~ 43750702 (-)
LOC118938081 LOC106591500 coding downstream 139933 43727232 ~ 43728256 (-)
LOC118938308 LOC106591500 coding downstream 170581 43695000 ~ 43697608 (-)
LOC118938553 LOC106591500 coding downstream 185189 43680432 ~ 43683000 (-)
zgc:158403 LOC106601368 coding upstream 109445 43977147 ~ 43992248 (-)
tspan35 LOC106601289 coding upstream 129113 43998452 ~ 44010679 (-)
LOC110486478 LOC106601191 coding upstream 147251 44016590 ~ 44021722 (-)
epor LOC106601362 coding upstream 154714 44024053 ~ 44029014 (-)
rab3db LOC106601190 coding upstream 160616 44029955 ~ 44043512 (-)
G1177614 NA non-coding downstream 2931 43833450 ~ 43865258 (-)
G1177634 NA non-coding downstream 3987 43858602 ~ 43864202 (-)
G1177633 NA non-coding downstream 31402 43835558 ~ 43836787 (-)
G1177589 NA non-coding downstream 113750 43754123 ~ 43754439 (-)
G1177566 NA non-coding downstream 133268 43701569 ~ 43734921 (-)
G1177641 NA non-coding upstream 5887 43875226 ~ 43878468 (-)
G1177643 NA non-coding upstream 7803 43877142 ~ 43880341 (-)
G1177707 NA non-coding upstream 103809 43973148 ~ 43973355 (-)
G1177719 NA non-coding upstream 126415 43995754 ~ 43995962 (-)
G1177897 NA non-coding upstream 145233 44014572 ~ 44014850 (-)
G1177552 NA other downstream 252181 43601363 ~ 43647736 (-)
G1177238 LOC106607096 other downstream 453086 43414159 ~ 43415103 (-)
G1177175 NA other downstream 505835 43352501 ~ 43362354 (-)
G1177047 NA other downstream 791836 43059430 ~ 43076353 (-)
G1176972 LOC106607127 other downstream 818645 43039174 ~ 43049544 (-)
G1177709 LOC106601291 other upstream 104200 43973539 ~ 43974057 (-)
G1178281 NA other upstream 593615 44462954 ~ 44463226 (-)
LOC110485184 LOC106601341 other upstream 614283 44467268 ~ 44545484 (-)

Expression


Co-expression Network